Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5371 |
Symbol | fadD |
ID | 7380724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 369048 |
End bp | 370562 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643648985 |
Product | malonyl-CoA synthase |
Protein accession | YP_002547222 |
Protein GI | 222106431 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.132829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACC ATCTTTTTGA TGCTATCAAG GCCGCAGCAA GGCCTGATTC ACCATTCATT CTGACCAATG GCGGAAGGAT CTGGACGTAT GACGATGCGA TTGCGCTTTC CGGACAGATT GCTGGCGCTA TTGCCAAGCT CGGCATTCAG CCCGGCGACC GGATTGCAGT GCAGATCGAG AAAAGCCCGG AAGCGCTGAT CCTCTACCTG GCCTGCCTTC GCGCCGGCGC GGTCTACCTG CCGCTGAACA CGGCCTATAC GCTTGCCGAA CTGGATTATT TCATTGGTGA TGCCGAGCCG AAGCTGGTGG TTGTCTCCTC CTCCGCGCTG GAGCCGCTGC GCAAGGTTGC CGAGCCCTAT GGTGCGCGCG TTGAAACGTT GAACGCGGAC GGCTCAGGCT CGCTGATCGA TCTTGCCCGC ACCGAACCGA CCGATTTCGC CAATGTCGCC CGCGCTTCCG ACGATCTCGC CGCCATCCTT TATACGTCGG GAACAACCGG TCGCTCCAAG GGCGCGATGC TGACCCATGA CAATCTCCTG TCGAATGCCT TGACCCTGCG CGATTTCTGG CGCGTCACAA GCGATGACCG GCTGATCCAT GCCCTGCCGA TTTTCCATAC GCACGGGCTG TTCGTCGCCA CCAATGTGAC CCTGCTGTCT GGCGCGTCAA TGATCCTGTT GCCAAAATTC GATCCTGACG AAGTGCTGTC ATTGATGCCG AATGCCACGC TTCTCATGGG CGTTCCAACC TTTTACGTGC GCCTCCTGCA AAGCCAGAAG CTGGACCGGG AGATTACGGC CAATATACGC CTTTTCATCT CCGGTTCTGC GCCACTGCTG GCCGAGACCC ATGTCGAATT CGGCAAGCGC ACAGGCAAAG CGATCCTTGA GCGCTATGGC ATGACCGAAA CCAACATGAA TACATCCAAC CCCTATGACG GAGACCGGGT TCCAGGAACC GTCGGCCTGC CGCTGCCGGG CGTGACTGTT CGCATCACCG ATCCCGCAAA TGGCACAATT TTGCCAGCGG GTGAAACAGG GTCGATTGAA ATCAAGGGGC CCAATGTCTT CAAGGGCTAT TGGCGGATGC CTGAAAAGAC CGCTGCTGAA TTTACCGCCG ACGGTTTCTT CATCAGCGGC GATCTCGGCA AGATTGATGA GAACGGCTAT GTCCATATTG TTGGACGTGG CAAGGACCTG GTGATCTCAG GCGGATACAA TATCTACCCC AAGGAGGTCG AAAGCGAGAT CGACCAGCTT GAAGGCGTCG TCGAAAGTGC TGTTATCGGC GTACCCCACC CGGATTTTGG CGAGGGCGTA ACCGCCATTG TCATCTGCAA GCCGGGCTTC TCGCTCGATG AGAAGGCAAT TCTCAATGCG CTTCAGGATC GGCTTGCCCG CTACAAGCAG CCCAAGCGCA TTATTTTCCT GGAAGACCTG CCGCGCAATA CGATGGGCAA GGTCCAGAAG AATGTTCTGC GCCAGCAATA TGCCGATCTT TACGCGGCAG CCTGA
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Protein sequence | MSNHLFDAIK AAARPDSPFI LTNGGRIWTY DDAIALSGQI AGAIAKLGIQ PGDRIAVQIE KSPEALILYL ACLRAGAVYL PLNTAYTLAE LDYFIGDAEP KLVVVSSSAL EPLRKVAEPY GARVETLNAD GSGSLIDLAR TEPTDFANVA RASDDLAAIL YTSGTTGRSK GAMLTHDNLL SNALTLRDFW RVTSDDRLIH ALPIFHTHGL FVATNVTLLS GASMILLPKF DPDEVLSLMP NATLLMGVPT FYVRLLQSQK LDREITANIR LFISGSAPLL AETHVEFGKR TGKAILERYG MTETNMNTSN PYDGDRVPGT VGLPLPGVTV RITDPANGTI LPAGETGSIE IKGPNVFKGY WRMPEKTAAE FTADGFFISG DLGKIDENGY VHIVGRGKDL VISGGYNIYP KEVESEIDQL EGVVESAVIG VPHPDFGEGV TAIVICKPGF SLDEKAILNA LQDRLARYKQ PKRIIFLEDL PRNTMGKVQK NVLRQQYADL YAAA
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