Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5363 |
Symbol | gsp |
ID | 7380717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 363164 |
End bp | 364318 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643648978 |
Product | glutathionylspermidine synthetase |
Protein accession | YP_002547215 |
Protein GI | 222106424 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0754] Glutathionylspermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCA TCACCATTGC GGAACGTTCC GATTGGCGCG ATAAGGCGCG CGCCGTCGGC TTTGGCTTTC ATGAAATGTA TGGCGAGCCC TATTGGGTGG ACGATGCCGC CTATGTGTTT TCCCTGGAAG AGATTGAAAC CCGCATAGAG ACGCCAAGTC AGGAGCTGCA CGATATGTGC ATGGACCTGA TCGGTGACAT CGTTGAAAAC GAGGAGGTCC TCGACCGGCT AGCCATCCCA GACGATCTCC GCGACGTGGT CCGCAGATCC TGGCAACGCC AGGACCGGCA TCTCTATGGG CGTTTCGATC TTGCCTATGA TGGCGAAGGC CCCGCCAAGC TGCTGGAATA TAACGCCGAC ACGCCGACAT CCGTTTTCGA GACCGCCTAT TTCCAGTTCA ATTGGCTCAC CGATCAGCAG GCGCTTGGCG CGCTGCCCGC CGATGCCGAC CAGTATAACC TGTTGCAGGA AAGCCTTGTG GAGGCATTCG AGCAGTTTCC GAAACAGTCG ATTTTCCATT TCGCGGCGAT GACCGAGAAT GAGGAAGATC GCGGCACCAC GGTCTATCTG ATGGATTGCG CCCTCCAGGC CGGGCACCGC GTCGAACTTC TCGATATCGG CGATATCGGC ATTGATGCAG AAGGGCGCTT TACGGATCTG CAAGACAGGG TGATCGACCA GTGTTTCAAG CTCTACCCCT GGGAATTCAT GCTGCGCGAG CCATTTTCCC GGCAATTGGC ACGGTCCGGC GATGTGTTTA TCGAACCCGC CTGGAAATCA CTACTGTCCA ACAAGGGGCT GCTACCCTTG CTGTGGCAGC GTCACCCTAA TCACCCCAAT CTATTGCCAA GCTTTTTTGC CGACGATCCC GCCGCCTCAA GCCTTGGCGA CTACGTGCGA AAGCCGCTTC TGTCGCGCGA GGGCGAAAAC GTCACGCTTT TCCAAGGTGG CACGGAATCT CTTGTCTCCC CAGGTGGTTA CGGCGAGGAA GGATTTATCG TTCAAGCCTA TGCGCCTCTT TTCGAGAGCC AGGCGGGCTT TGCCGTGCTC GGCAGCTGGA TTGTCGGTGA CAGAGCCTGC GCCCTTGGCA TCCGCGAGGA CCGATCCCGC ATCACCGCCA ATCTCTCGCG CTTTGTGCCG CATGTGATTG TCTAA
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Protein sequence | MKRITIAERS DWRDKARAVG FGFHEMYGEP YWVDDAAYVF SLEEIETRIE TPSQELHDMC MDLIGDIVEN EEVLDRLAIP DDLRDVVRRS WQRQDRHLYG RFDLAYDGEG PAKLLEYNAD TPTSVFETAY FQFNWLTDQQ ALGALPADAD QYNLLQESLV EAFEQFPKQS IFHFAAMTEN EEDRGTTVYL MDCALQAGHR VELLDIGDIG IDAEGRFTDL QDRVIDQCFK LYPWEFMLRE PFSRQLARSG DVFIEPAWKS LLSNKGLLPL LWQRHPNHPN LLPSFFADDP AASSLGDYVR KPLLSREGEN VTLFQGGTES LVSPGGYGEE GFIVQAYAPL FESQAGFAVL GSWIVGDRAC ALGIREDRSR ITANLSRFVP HVIV
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