| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5347 |
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| Symbol | |
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| ID | 7380704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 347007 |
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| End bp | 347735 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648965 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002547202 |
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| Protein GI | 222106411 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCCCA AACGCGCCCT GAGCCAAGAT CCGCATATCG CCGCACTGCC ACCGCTGGAC
CGTGTTCAGC AGGTGAGTGG GGCCATGGTC GGCTATATCA ACAAGGCCGG TCTCAAGCGT
GGAGATCGCC TGCCGACGGA ACGCGAATTG ATGAACGCGC TCGGTGTTGG CCGTTCAACA
GTGCGTGAAG TGATCGGGCG GTTTCAGGCT TTGGGCGTGG TGGAGACCCG AAAAGGCAGC
GGGACCTATC TTTTGCAGCC TGTGAGTGCT GCCACGGTCC ACATGCCGTT GATGCTGGAG
ACGGTGAATT TACGCGATGC TCTTTTGCAA ACGCTGGAAG TGCGTCGTGG CATTGAAGTC
GAGGCCGGAG CCTTGGCTGC GATGCGCCGA ACGGAAGAGG ATTTGCGGAT CATCGAGGAA
AAGCTCGATG AAATGGAGCG GGTGCATCTG GCCAAGGGAA CATCCGGCAA GGAAGATCTG
GCTTTCCATG TGGCGATCTA CGATGCCACG CATAACCCGC TGTTCAAACA GCTTCTGGAG
CAGATGCGCG AAGCCTTCGA ACGCTTCTGG CATAAGCCGT TTGACCGGCC CGATTTTGCC
CGCCGCTCCT TTCCCTTTCA TCGCACCTTG TTCAGCGCCA TTGCTGACCA GGACAGTGAA
GGTGCGCGCC GTGAAACCCT CAAAATTCTT GCCGTGGTGG AAGAAGACAT CAAGGAAATG
TCCAAATGA
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| Protein sequence | MFPKRALSQD PHIAALPPLD RVQQVSGAMV GYINKAGLKR GDRLPTEREL MNALGVGRST
VREVIGRFQA LGVVETRKGS GTYLLQPVSA ATVHMPLMLE TVNLRDALLQ TLEVRRGIEV
EAGALAAMRR TEEDLRIIEE KLDEMERVHL AKGTSGKEDL AFHVAIYDAT HNPLFKQLLE
QMREAFERFW HKPFDRPDFA RRSFPFHRTL FSAIADQDSE GARRETLKIL AVVEEDIKEM
SK
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