Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5337 |
Symbol | |
ID | 7380696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 338494 |
End bp | 339408 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643648957 |
Product | aldolase |
Protein accession | YP_002547194 |
Protein GI | 222106403 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3684] Tagatose-1,6-bisphosphate aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.335204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTGA TGACAACGGC AGAACGACGC GGATACCATC AGATTTGCAA TGGCAGCGGC TCCATGATGG TCATTGCATG TGATCAGCGC GGCGGCATGC GATCCATTCT TGCCGCGACC CCGGAAGAAC AAGCGAAAAT CGGCAATGAT ATTCTTGGTG AAACCAAGGC CGATATTGCA CGCTATCTGG CCTCTCATGC CGGCTGCGTG CTCGTTGATC CGGTCTGCGC CGTACCCGGG CTGATCGACA ATGATATTCT TCCAAGGGAT ACCGCACTTC TGATCGGTAT CGATGCCTCC GGATGGGACA CCTCACCCGA AGGCTACCGC ATTTCCAAGA TGGTGGAAGG CGTCGATGCG CGGCGCGTTC GCGCTCTTGG TGCCACCGGC GGCAAAATCA TGGTCTATCT GCGGATGGAT ACTCCGGCGG CCAATGTTGC AAACCTTGAA ACCCTGAAGA GGACCATAGA GGATTTCGCC CGCGAGGACT TTCTTCTGGT CGTCGAATTC CTGACCTACC AGCTTGAAGG CGAAAGCCGC GAGGACTATC AGGCGAAGAT TCCGCAACTT ATTGTCGAAG GCTCACGCGC CTGCCTGGAG CTGGGGTCCA AAGTTCTGAA AATTCCTTAT CCCGGCTCCG AAAAAGCCTG CGCCGAGGTC ACGAAAGTAG CCGGTGACGT CCCTTGGGCC GTTCTTTCGG CTGGCGTCGA CCATGAAACC TTCCTTCTCC AGGTCGAGGC GGCCATGAAG AACGGGGCCT CCGGCGTCAT CGCTGGCCGC TCCCTTTGGA AAGACTGCAT CGACCTCGAC CGAAATATCT CGAAAGAGAA GCTTTCGACA ATTGCCGTGT CCCGATTGCA TGATATTCAA GACATTATCG GGCGCTATCG CAACAAGCAG AGAGTTGCGG CGTAA
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Protein sequence | MTVMTTAERR GYHQICNGSG SMMVIACDQR GGMRSILAAT PEEQAKIGND ILGETKADIA RYLASHAGCV LVDPVCAVPG LIDNDILPRD TALLIGIDAS GWDTSPEGYR ISKMVEGVDA RRVRALGATG GKIMVYLRMD TPAANVANLE TLKRTIEDFA REDFLLVVEF LTYQLEGESR EDYQAKIPQL IVEGSRACLE LGSKVLKIPY PGSEKACAEV TKVAGDVPWA VLSAGVDHET FLLQVEAAMK NGASGVIAGR SLWKDCIDLD RNISKEKLST IAVSRLHDIQ DIIGRYRNKQ RVAA
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