| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5156 |
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| Symbol | acd |
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| ID | 7380956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 149297 |
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| End bp | 150559 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648809 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_002547046 |
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| Protein GI | 222106255 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0718281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CAGATCGTAC ACTCCACCGT CAGGCGGCCC TGACGGCTGG TCGCCCGGCT
CCGCATATTC CGCCACGGCG GACCAAAGCG CATGTGATCA AGGACGATGC CGAGGCAGTC
GCTGTTGCCA AGGAATTGGC CCGTGACTTT GCCGTGGGCG CAGCAGAGCG TGATCGGCAG
CGGCGTTTGC CGGTGGCCGA GATTGACCGC TTTTCCCAAA GTGGGCTTTG GGCCATTTCA
GTGCCAAAGG CTTACGGCGG CGCTGGCGTA TCGACGGTGA CACTCGCGGA GGTGACGGCG
ATCATCTCGG CAGCAGATTC CTCCATCGGG CAAATTCCGC AAAACCATTT CTATATGGTG
GAAGCGCTGC GGCTCTCTGG TTCCGATGCG CAGAAGGCGC ATTATTTTCA GCGGGTTCTC
GATGGGGATC GGCTGGGCAA TGCCTTTACC GAAATCGGCA CCAAAACCCC GGTGGATTAC
AAGACCCATT TTGCGGAGCG CGATGGCAAG CTGCTGTTAA ACGGACAGAA ATTCTACGCG
ACCGGATCGC TGTTTGCCCA CATCATTGTT GCCGTTGCCA AAGGTCCGAA TGGCCGCGTG
CATCTGGTGT TTATCGATCG CGCCACACCC GGTCTTGATC TGGTGGATGA CTGGACCTCC
TTTGGTCAGC GCTCCACCGG CAGCGGCACG GTGACCTTTG ACGATGTGGA AATCACCCCG
TTTCAGGTGG TGGATCATGA TGAGAATTTC GATAAGCCAA CGCCGATGGG ACCATTTGCC
CAGATCATCC ATTCGGCAGT GCAAGTCGGT ATTGCGCGGG GTGCTTTGGC TGAAACCATC
TCCTATGTCC GCGCCCATGC AAGGCCGTTT TTCGAGCTGA GTATTGAGCA TGGCTATGAA
GACCCACACA CCATCCATGC GGTGGGCGAT GTCTCCATCC GCGTCCATGC CGCCGATGCG
CTCTTGGCGC GGGCAGGGCG CATTCTGGAC ATTGCAACGG CCAATCCCAC CGCGCAAACG
GTGGCAGAAG CCTCGATTGC CGTGGCCGAA GTGAAAGCAT TGGGGACGGA GGTGGCGCAA
TTGGCCGCCA CCAAGCTGAT TGAGCTTGGT GGTGCGCGCT CCACGTTGGA GGCTTATGGG
CTGGATCGCT ATTGGCGCAA TGCTCGCACC CATTCGCTGC ACGATCCAGT GCGCTGGAAA
TATCACCATA TCGGCAATTT CTACCTGAAT GATCAGCTGC CGCCACGCCA CGGGGCCATC
TGA
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| Protein sequence | MSTTDRTLHR QAALTAGRPA PHIPPRRTKA HVIKDDAEAV AVAKELARDF AVGAAERDRQ
RRLPVAEIDR FSQSGLWAIS VPKAYGGAGV STVTLAEVTA IISAADSSIG QIPQNHFYMV
EALRLSGSDA QKAHYFQRVL DGDRLGNAFT EIGTKTPVDY KTHFAERDGK LLLNGQKFYA
TGSLFAHIIV AVAKGPNGRV HLVFIDRATP GLDLVDDWTS FGQRSTGSGT VTFDDVEITP
FQVVDHDENF DKPTPMGPFA QIIHSAVQVG IARGALAETI SYVRAHARPF FELSIEHGYE
DPHTIHAVGD VSIRVHAADA LLARAGRILD IATANPTAQT VAEASIAVAE VKALGTEVAQ
LAATKLIELG GARSTLEAYG LDRYWRNART HSLHDPVRWK YHHIGNFYLN DQLPPRHGAI
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