Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5150 |
Symbol | |
ID | 7380951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 141303 |
End bp | 142076 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643648804 |
Product | ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) |
Protein accession | YP_002547041 |
Protein GI | 222106250 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.915192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACG CCAGATTGTT GCAGGTGGAT GGGCTGCACG CCACCTACAA TCATGCCATC ACCGCTTTGC ATGGTGTCAG CTTTTCGCTT GCGCGGGGCG AGATCCTAGC ACTTTTGGGC GCGAATGGAG CGGGCAAGAC GACGGCGCTG AAGGCGGTGT CAAACCTTCT TTCGGCAGAG CGCGGACAGA TCAATGCCGG GTCTATCCAT TTTGACGGCG TAGATGTCAC CAAAACAAGC CCGGCGGCGC TGGTGCGCGC CGGCCTTGTA CAGGTATTGG AAGGGCGCCA TTGCTTCCAT AGCCTGTCCG TCGAGGAAAA TCTGACGTGT GGTGGTCTGG GACGTAGCAG TTCGCGGGCG GAAATCGCCA ATGATCTCGA GCGTATTTAT GGGCTCTTTC CCCGACTGAA AGAAAAGCGC CGGACACTGT CGGGCCTCAC CTCCGGTGGC GAGCAACAAA TGACGGCAGT TGGCCGGGCT CTGATGTCGC GTCCCCGTCT GCTTGTTCTT GACGAACCGT CCATGGGTCT TGCCCCCATC GTGGTGCAGG ACATATTTCG CACCCTGCGC CGATTGAACC GGGAGGAGGG GCTATCCATT CTCGTCGCCG AACAAAATTC GGCGATTGCT CTCACCTATG CCCATCGCGC CACCATTCTC GAAAATGGAA AGGATGTGCT GACGGGCACC GCCCGCGAGA TCCGCGAGCG AGACGATGTG AAATCCTTTT ATCTCGGGCA GAACAATCGG GTTGCGAATG ACCATGTCAT ATGA
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Protein sequence | MKDARLLQVD GLHATYNHAI TALHGVSFSL ARGEILALLG ANGAGKTTAL KAVSNLLSAE RGQINAGSIH FDGVDVTKTS PAALVRAGLV QVLEGRHCFH SLSVEENLTC GGLGRSSSRA EIANDLERIY GLFPRLKEKR RTLSGLTSGG EQQMTAVGRA LMSRPRLLVL DEPSMGLAPI VVQDIFRTLR RLNREEGLSI LVAEQNSAIA LTYAHRATIL ENGKDVLTGT AREIRERDDV KSFYLGQNNR VANDHVI
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