| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5135 |
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| Symbol | rbsA |
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| ID | 7380938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 123674 |
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| End bp | 125248 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648791 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002547028 |
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| Protein GI | 222106237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.543478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGGAG TGTCGCTTGC CGCTGGCGAG TGCAAACCCG CGCCGCTGCT TTTAAAACTG
GAGGGCGTCA CCAAGGAATT CCCTGGTGTG AAGGCCCTGC AGGACGTCAG CCTTGATGTC
AGGGCCGGTG AAGTCCATGC GGTTTGCGGA GAGAATGGAG CCGGAAAATC CACGCTGATG
AAGATCATCA GCGGCGTCTA CCAGAGAGAC GCTGGCAACA TGATCTACAA GGGCGAGACG
GTTCATTTCA CCTCCACATT GCAGTCGGAA GCAGCCGGAA TTGCCATCAT CCATCAGGAA
CTCAACCTTG TTCCGCATCT CTCCGTTGCC GAAAACATCT ATCTTGCCCG GGAACCACGG
CTAAGTTTTA TCGGTGGGGA CTTCATGGTC AACAGGCGCA AGCTGCGCCA GGACGCCAAG
CGATGCCTTG ACCGTCTGGG GGTCGACATC AACCCCGACG CGCAGGTGCG CACGCTCTCC
GTCGCGCAGC GGCAGATGGT CGAGATTGCC AAGGCCCTTT CGCTCAACGC CTCCGTTCTC
ATCATGGATG AACCGACCTC CTCGCTAACA CAACAGGAAG CACAGCTTCT GTTTCGCGTC
ATCCGTGACC TGAAACGCGA GGGAACCGGT ATCATCTATA TCTCGCACCG GCTCGACGAA
ATGGCAGAGA TCGTTGATCG CGTCACGGTG CTGCGCGATG GGCGCTACAT CTCCACAGAT
GATTTCGATG CGATCACCGT GGACTATATC GTGGCCCGCA TGGTGGGCCG CTCGCTGGAA
GAGAAATTCC CGGCACCGAC CCGTTCGCCA AGCAAGGACA CCATCTTTTC CGTTTCGGGT
CTTACCCGCC ATGGCGTTTT CTCCGATATC GGCTTTGAAC TGCGCCGCGG TGAAATTTTG
GGCTTTGCGG GATTGATGGG TGCAGGCCGG ACGGAAGTGG CCCGGGCGAT CTTTGGAGCC
GATCCGTTCG ACAGTGGAAC ACTCCTGCTC GAAGGGCGGC CCCTTTCGAT TTCCGACCCG
CGTTCGGCCA TTGACGCAGG GCTTGCCTAT CTTTCCGAGG ACCGCAAGGC GGGAGGCCTG
GCCGTCAAGA TGCCGGTCGA TGCCAATCTG ATGATGGCCA ATATGGAGGC CGTCTCCAAT
CCGTTCGGCG TGATCGACAA GGAACTGCAC CGCCAGTCGA GCCAGCACTA TGTCAATCTG
CTCAATATCA AAACGCCCAG CCTGAACCAA CCCGTCCGCC TTCTGTCGGG CGGAAACCAG
CAAAAGATCA TTATTGGAAA ATGGCTGTTC CGGCAGCCAA AGATCATGTT CTTTGATGAG
CCGACGCGAG GCATTGATGT GGGTGCCAAG CTCGCTATCT ACCGGCTGAT GGATGAGCTT
GCCGCCAAAG GCATCGGCAT CATTCTGATC AGTTCCGAGC TTCCAGAAAT CCTCGGACTA
TCGGACCGCG TTGCAGTTTT CCACGAAGGC CGCATCACCG CAACACTGAC GACGCGCGAG
ACGTCGCAAG AAGAGATCAT GCTGTATGCC TCCGGCCGTG TCCGGGAGAG CGCGCGAGGA
ATGACCCATG GCTGA
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| Protein sequence | MGGVSLAAGE CKPAPLLLKL EGVTKEFPGV KALQDVSLDV RAGEVHAVCG ENGAGKSTLM
KIISGVYQRD AGNMIYKGET VHFTSTLQSE AAGIAIIHQE LNLVPHLSVA ENIYLAREPR
LSFIGGDFMV NRRKLRQDAK RCLDRLGVDI NPDAQVRTLS VAQRQMVEIA KALSLNASVL
IMDEPTSSLT QQEAQLLFRV IRDLKREGTG IIYISHRLDE MAEIVDRVTV LRDGRYISTD
DFDAITVDYI VARMVGRSLE EKFPAPTRSP SKDTIFSVSG LTRHGVFSDI GFELRRGEIL
GFAGLMGAGR TEVARAIFGA DPFDSGTLLL EGRPLSISDP RSAIDAGLAY LSEDRKAGGL
AVKMPVDANL MMANMEAVSN PFGVIDKELH RQSSQHYVNL LNIKTPSLNQ PVRLLSGGNQ
QKIIIGKWLF RQPKIMFFDE PTRGIDVGAK LAIYRLMDEL AAKGIGIILI SSELPEILGL
SDRVAVFHEG RITATLTTRE TSQEEIMLYA SGRVRESARG MTHG
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