Gene Avi_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5101 
Symbol 
ID7380909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp90294 
End bp91097 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content55% 
IMG OID643648762 
ProductTransglutaminase domain-containing protein 
Protein accessionYP_002546999 
Protein GI222106208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC GCGCGGGATT TCGCATAGGT TACGAATGCC AGCAAGAGAC GGCTATGCTG 
CTGGTGCTCA ATATCCATCC ATCCCGTCGC ACCGATCTTC TGCAGGATCA GGTCCTGAGT
TTTGACCGGC CGATTGAGGC CTGGGGTTAT TTCGATGGCT TCGGCAATGC TTGTAGCCGC
ATCGTCGCAC CGCCGGGCGT GACGACGATT TCTACGGAAT TCGAGATCTA CGATAGCGGT
CTTCCAGATC CGGTGCCTGA GAATGCGTGG CAGCACGACA TCAAGGATCT TCCGGATGAC
GTGCTCGTCT TTCTGCTCGG CAGCCGTTAT TGCGATACGG ACCGCCTTTC AGATTTCGCC
TGGAAGACGT TTTCTTTTAC CCCCTTGGGT TGGCCGCGGG TGAAGGCGAT CCTGGATTTC
GTCCACAATC ACATCACCTT CAACTATCAG AAGGCTGATC TTCTCCGCAC GGCTTTCGGA
GGTTTTACCG ATCAAACGGG CGTTTGCCGC GATTTTGCGC ATCTTGCGAT CACCCTATGC
CGTTGCATGA ATATTCCGGC GCGTTATTGC ACCGGGTATC TGGGGGATAT CGGCGTGCCT
GATGATCCGA ACCCAATGGA TTTCAGTGCA TGGTTTGAAG TCTATCTCGG CGGTCGCTGG
CATACAGTTG ATGCCCGACA CAACAAGCCC CGGATAGGCC GCATCCTCAT GGCCATCGGA
CGGGATGCCA CGGACGTGGC GCTTTCAACT GCCTTCGGCC CCGCCATCTT GACGCAATTC
GACGTGACAA CCATCGAGTT ATAG
 
Protein sequence
MKIRAGFRIG YECQQETAML LVLNIHPSRR TDLLQDQVLS FDRPIEAWGY FDGFGNACSR 
IVAPPGVTTI STEFEIYDSG LPDPVPENAW QHDIKDLPDD VLVFLLGSRY CDTDRLSDFA
WKTFSFTPLG WPRVKAILDF VHNHITFNYQ KADLLRTAFG GFTDQTGVCR DFAHLAITLC
RCMNIPARYC TGYLGDIGVP DDPNPMDFSA WFEVYLGGRW HTVDARHNKP RIGRILMAIG
RDATDVALST AFGPAILTQF DVTTIEL