Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5101 |
Symbol | |
ID | 7380909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 90294 |
End bp | 91097 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643648762 |
Product | Transglutaminase domain-containing protein |
Protein accession | YP_002546999 |
Protein GI | 222106208 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAC GCGCGGGATT TCGCATAGGT TACGAATGCC AGCAAGAGAC GGCTATGCTG CTGGTGCTCA ATATCCATCC ATCCCGTCGC ACCGATCTTC TGCAGGATCA GGTCCTGAGT TTTGACCGGC CGATTGAGGC CTGGGGTTAT TTCGATGGCT TCGGCAATGC TTGTAGCCGC ATCGTCGCAC CGCCGGGCGT GACGACGATT TCTACGGAAT TCGAGATCTA CGATAGCGGT CTTCCAGATC CGGTGCCTGA GAATGCGTGG CAGCACGACA TCAAGGATCT TCCGGATGAC GTGCTCGTCT TTCTGCTCGG CAGCCGTTAT TGCGATACGG ACCGCCTTTC AGATTTCGCC TGGAAGACGT TTTCTTTTAC CCCCTTGGGT TGGCCGCGGG TGAAGGCGAT CCTGGATTTC GTCCACAATC ACATCACCTT CAACTATCAG AAGGCTGATC TTCTCCGCAC GGCTTTCGGA GGTTTTACCG ATCAAACGGG CGTTTGCCGC GATTTTGCGC ATCTTGCGAT CACCCTATGC CGTTGCATGA ATATTCCGGC GCGTTATTGC ACCGGGTATC TGGGGGATAT CGGCGTGCCT GATGATCCGA ACCCAATGGA TTTCAGTGCA TGGTTTGAAG TCTATCTCGG CGGTCGCTGG CATACAGTTG ATGCCCGACA CAACAAGCCC CGGATAGGCC GCATCCTCAT GGCCATCGGA CGGGATGCCA CGGACGTGGC GCTTTCAACT GCCTTCGGCC CCGCCATCTT GACGCAATTC GACGTGACAA CCATCGAGTT ATAG
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Protein sequence | MKIRAGFRIG YECQQETAML LVLNIHPSRR TDLLQDQVLS FDRPIEAWGY FDGFGNACSR IVAPPGVTTI STEFEIYDSG LPDPVPENAW QHDIKDLPDD VLVFLLGSRY CDTDRLSDFA WKTFSFTPLG WPRVKAILDF VHNHITFNYQ KADLLRTAFG GFTDQTGVCR DFAHLAITLC RCMNIPARYC TGYLGDIGVP DDPNPMDFSA WFEVYLGGRW HTVDARHNKP RIGRILMAIG RDATDVALST AFGPAILTQF DVTTIEL
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