Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5059 |
Symbol | ssuB |
ID | 7381216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 52062 |
End bp | 52877 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643648730 |
Product | ABC transporter nucleotide binding/ATPase protein (nitrate/sulfonates) |
Protein accession | YP_002546967 |
Protein GI | 222106176 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGG CAACTGCTGC CGCCGTGCGC CTCGCGCCGG CCCCCGAAAA AGCGCCGCTT CTTTCCGTTG ATCGCGTTAC GCTGCGTTAC AAAACGCCCA ATCTGCTGAT TACCGCCACT GAGGATGTCA GTTTCGATGT GCGGGAATCC GACCGCTTCG TGCTGCTCGG CCCATCCGGC TGTGGGAAGT CGACGCTGCT GAAAGCCGTT GGCGGCTATA TGACCCCAGT ATCCGGCACG ATCCATATCA ATGGCCGCCA AGTGAAAGCC CCCGGACCGG ACAGGATGAT GGTGTTCCAG GAGTTCGACC AGCTGATGCC CTGGAAGACC GTGCTGGAAA ACGTGATGTT CCCGCTTCTC GTCGCCCGTA AAATGCCCAG GCCCGAAGCC GAGGCACTGG CCCGCCATTA TATCGACAAG GTCAAGCTGA CCCGGGCCGT CAACAGCTAC CCTCATACGC TGTCGGGCGG CATGAAGCAG CGCGTGGCGA TTGCCCGCGG CATGGCCATG CAGCCGGATA TCCTGTTGAT GGACGAGCCT TTCGCCGCAC TGGACGCCCT GACCCGACGG CAGATGCAGG ACGAATTGCT TCAGCTTTGG GAAGACACCA AATTCACCGT GATCTTCGTC ACCCATTCGA TTGCTGAAGC GATCAAGATT TCCAACCGCA TCCTGCTGCT GTCACCGCAT CCGGGGCGCG TGAAGGCCGA GGTCGTCGAT GTCGACAAGG TGAGCCAGGC GGATGGCAGT GCCGCAGCTT TGGAGCGCGA TATCCACAAC CTGCTGTTCT CCAACGAACC CGGTCACAAG GAATAG
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Protein sequence | MMQATAAAVR LAPAPEKAPL LSVDRVTLRY KTPNLLITAT EDVSFDVRES DRFVLLGPSG CGKSTLLKAV GGYMTPVSGT IHINGRQVKA PGPDRMMVFQ EFDQLMPWKT VLENVMFPLL VARKMPRPEA EALARHYIDK VKLTRAVNSY PHTLSGGMKQ RVAIARGMAM QPDILLMDEP FAALDALTRR QMQDELLQLW EDTKFTVIFV THSIAEAIKI SNRILLLSPH PGRVKAEVVD VDKVSQADGS AAALERDIHN LLFSNEPGHK E
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