Gene Avi_5034 details

Gene Information

• Locus tag: Avi_5034
• Symbol: gntK
• ID: 7381196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 28529
• End bp: 29032
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643648710
• Product: gluconokinase
• Protein accession: YP_002546947
• Protein GI: 222106156
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3265] Gluconate kinase
• TIGRFAM ID: [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCCG TGGTGAAATT TGTCCTCATG GGTGTGTCCG GATGCGGAAA ATCCTCCGTT 
GGCGCTGCAT TGGCGGCAAG GCTCAGTGCG GTCTATATCG ACGGCGACGA CCTGCATCCG 
CCGCAAAATA TCGCCCGGAT GCAGGCAGGC ATTCCGCTTG GTGACGAGGA TCGCTGGGCA 
TGGCTGGATG CGGTCGGAAC ACGCCTTGCC GGGGGACAAG GCGTGACCAT TATCGGGTGT 
TCGGCGTTGA AGCGGGCGTA CCGCGACAGG ATCAGGGAAA AGGCTTGTGG TTCTGTGCGT 
TTCATCCATC TGGCTGGCAG CCATGCCGTG ATTGCCAGAC GTGTCGCTGA GCGACCAGGG 
CATTTCATGC CCGCTTCGCT GCTCGACAGC CAATTTGCAG CGCTTGAACC GCCGGGGGCC 
GATGAACAGG CGGTGACCGT CGATATCGAT CAGCCGCTTG ACAGTCTGGT CGCGGCGATT 
GTTTCGGCCA TAGGGGAGGA GTGA 

 

Protein sequence

MNAVVKFVLM GVSGCGKSSV GAALAARLSA VYIDGDDLHP PQNIARMQAG IPLGDEDRWA 
WLDAVGTRLA GGQGVTIIGC SALKRAYRDR IREKACGSVR FIHLAGSHAV IARRVAERPG 
HFMPASLLDS QFAALEPPGA DEQAVTVDID QPLDSLVAAI VSAIGEE