| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4367 |
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| Symbol | pdxK |
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| ID | 7387943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3683622 |
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| End bp | 3684500 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643653013 |
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| Product | pyridoxamine kinase |
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| Protein accession | YP_002551184 |
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| Protein GI | 222150227 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
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| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA GCCCAGCCGG TGCCGTCATC GCCATTTCCA GCCATGTCAT TCGCGGATCG
GTCGGCAATC GCGCCGCCGT CTTCGCGCTT GAAAGTCTTG GCTTCCCGGT CTGGTCGATG
CCAACTGTGG TTTTGCCCTG GCATCCGGGC CACGGCCCTT CCACCCGCAT GAGCTTTCCC
GACGATGTTT TCGATGCGGC CATCGATGAC CTGATCCGGG CACCCTGGCT TTCCGAGGTT
AAGGCTGTGA TGACGGGCTA TTTCGGCAGC GCACGCCAGC CATTGGCTGT GGCCCGGCTG
GTTCAGGCGT TGAAGCAGCA TAATCCCGAT CTCGTTTATC TCTGCGATCC TGTCATCGGC
GATCTGCAGG GCCTCTACGT GCCGGAGGCA ACGGCGGTTG CGATCCGCGA TCACTTGATC
CCGCTGGCCG ATATCGCCAC GCCCAACCGC TATGAACTGG CCTGGATGGC CGGTGCAGAG
CTGGACACCA ATGCCGCGAT CATCGATGCG GCCCTGTCGC TCGGGCCGTC GCTGATGGCC
GTTACCTCAG CGGTGCCGAT GATGGCGGGC AGTATTGGCA ACCTGCTCCT GTCGAACCGC
AATGCGCTGC TGGCCGAACA CCGGGCGATG GACGGGGTGC CGAACGGGTT GGGCGATCTA
TTTTCGGCGC TGCTTTTGGC CAGGCTTCTC CAGCAGCATA GCGAGGAGAA GGCCCTGCAA
CTGGCGACAG CCAGTGTCTA TGAAGTGCTG GCCCGCTCAC TGAAGCGCCA GAGTGACGAA
CTGACCCTGG AACAGGACCA ATCGAGCCTG ATCACGCCGA TGGCGCTGGT ACAGATTCGC
AGGCTGCTGC ATCCGGCCAG CCGACCGGTT CGCTCATGA
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| Protein sequence | MSESPAGAVI AISSHVIRGS VGNRAAVFAL ESLGFPVWSM PTVVLPWHPG HGPSTRMSFP
DDVFDAAIDD LIRAPWLSEV KAVMTGYFGS ARQPLAVARL VQALKQHNPD LVYLCDPVIG
DLQGLYVPEA TAVAIRDHLI PLADIATPNR YELAWMAGAE LDTNAAIIDA ALSLGPSLMA
VTSAVPMMAG SIGNLLLSNR NALLAEHRAM DGVPNGLGDL FSALLLARLL QQHSEEKALQ
LATASVYEVL ARSLKRQSDE LTLEQDQSSL ITPMALVQIR RLLHPASRPV RS
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