Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4331 |
Symbol | |
ID | 7386569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3652769 |
End bp | 3653923 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643652985 |
Product | MFS permease |
Protein accession | YP_002551156 |
Protein GI | 222150199 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.611947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAG GATTTTTCAC CAGGGAACGT CTGGCCGTTT CACTTCTGTT CCTGATGAAC GGCTTCATTA TCGGCTCATG GGCGCCCAAA GTGCCTGAAT TTGCCCGCAA TCTCGACCTG AGCGAAGCGC AGCTTGGTCT GATGATCCTC GTTCTGGGGC TCGGCTCGCT CGCCTGCATG CCGGTGGCTG GTGCCCAGAT CGCCCGCTAC GGCTCACGCC GGGTCACGCT CGCCTGCGCG CTGATATTTC TACCCACGCT GCTCCTGCTG ACGGTTGCGC CCAATATTCC CTTGGCGGCC CTGGCGATTT TCCTGTTTGG CGGCTTCATG GGCGCCATGG ATGTGGCGAT GAATGCCAAT GCGGTCGAGA CAGAAAGACA GATGGGGCGC TCGATCATGT CGTCCTGCCA TGCCTTCTGG AGCCTCGGCG GCCTGATTGG CGCCAGCATA GGCGGACCGC TGCTGGCCAT GGCCGGATCG ACGGTGCATA GCCTTGTCGC CACGGTCCTC GCCGCCCTGA TGCTGTTTGC TGCCTGGCCG ATCACCCTTC GCGACCAGCC CCATCCCGAT GCCGAGCATC GCAGGGCGCG CCTGCCGATG ACGCCGCTGC CCTGGCTTCT CGGCCTCGTC GCACTGTTTT GCATGATCCC GGAAGGTGCG GTGCTCGACT GGGGTGCTTT TTATCTGCGC AATGAACTGG GCGGCTCCAT TGCCACCTCA AGCTATGCCT ATGCCGGCTT CTCCTTGACC ATGGCGATCA TGCGCTTTGC CGGCGACATC GTCCGCGACC GGCTGGGGGC GGTGACAACC ATGCGGATTT GCGCCCTGAT CGCCATGATC GGCACGGCCA TTTCCGGCTT TGCTGCCGAT CCATGGACCG CCGTCATCGG CTTTGCCATC ATGGGTATCG GCATTTCCAA CCTGGTTCCC ATCGCCTTTT CCGCCGCTGG CAACCTGCCG GGCATGGCGC CGGGCGTCGG CCTGTCGGTG GTCAGCGCCA TGGGCTATTC GGGTATTCTG GTGGCCCCAT CGCTGATCGG TTTCGTCGCC GAGCATACGT CACTGGCGCT GGTGTTTCGC GTGCTCCCAG TGCTGATTCT GGTTGCCTTG CTGCTCTCCG GCCTTGCCCG GCATGCCGAC CGGCCCCAAG TTTGA
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Protein sequence | MQQGFFTRER LAVSLLFLMN GFIIGSWAPK VPEFARNLDL SEAQLGLMIL VLGLGSLACM PVAGAQIARY GSRRVTLACA LIFLPTLLLL TVAPNIPLAA LAIFLFGGFM GAMDVAMNAN AVETERQMGR SIMSSCHAFW SLGGLIGASI GGPLLAMAGS TVHSLVATVL AALMLFAAWP ITLRDQPHPD AEHRRARLPM TPLPWLLGLV ALFCMIPEGA VLDWGAFYLR NELGGSIATS SYAYAGFSLT MAIMRFAGDI VRDRLGAVTT MRICALIAMI GTAISGFAAD PWTAVIGFAI MGIGISNLVP IAFSAAGNLP GMAPGVGLSV VSAMGYSGIL VAPSLIGFVA EHTSLALVFR VLPVLILVAL LLSGLARHAD RPQV
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