| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4268 |
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| Symbol | thiQ |
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| ID | 7386516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3587415 |
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| End bp | 3588164 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652931 |
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| Product | thiamine ABC transporter ATP-binding protein |
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| Protein accession | YP_002551103 |
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| Protein GI | 222150146 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA CGGCCACTAT CCCCGATGCC GCAATTGTTC TCGACACGGT GCAACTGCGT
CTGGGAAACC AGAGTTTTGA GTTCAACGAT CAGATCGCGT CTGGAAAGAT CACCGCGATC
ACCGGCATGT CCGGCTCAGG CAAATCCACC CTGCTGAACC TGATTGCCGG GTTCGAGACG
CCCGATCAGG GCCGGATCCG GATTGGCTCG GAAGACATCA CGGATCTGCC ACCCGCCAAA
CGTCCGGTCT CCCTGGTGTT CCAGGACCAT AACCTGTTTG CCCATCTCGA TCTCGCCACC
AATATCGGCC TTGGCATCGA TCCGTCTCTG CGGCTTGGCG CGGCGGATCG GCTGGCGGTG
AGCCAAGCCC TGAAAAGAGT GGGACTTGGC GGCTATGACC GACGCAAACC CGCCACGCTT
TCCGGCGGAG AAAAGCAGCG CGCCGCCTTT GCCCGTGCGC TGGTCCGGCG CAAGCCGGTC
CTGTTGCTGG ACGAACCTTT TGCCGCCCTC GATCCCGGTC TGCGCGCCAG CATGGCCGAT
CTGCTGCTGG ATCTGCATCG CGAAACCGGC CAGAGCGTGT TGATCGTCAG CCACGATCCC
CAGGATGTGC GGCGCCTGGC TGATGATGTG CTGTTTCTGG ATCAAGGCCG CATTTCACTG
CATTGCGACG CAAAAACCTT CCTTTCCGGC GAAGGCCCAG CTGCACTCAA GACCTTTCTC
GGTCCCTTTC ATGATCGCGA CCGGTTTTAA
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| Protein sequence | MSETATIPDA AIVLDTVQLR LGNQSFEFND QIASGKITAI TGMSGSGKST LLNLIAGFET
PDQGRIRIGS EDITDLPPAK RPVSLVFQDH NLFAHLDLAT NIGLGIDPSL RLGAADRLAV
SQALKRVGLG GYDRRKPATL SGGEKQRAAF ARALVRRKPV LLLDEPFAAL DPGLRASMAD
LLLDLHRETG QSVLIVSHDP QDVRRLADDV LFLDQGRISL HCDAKTFLSG EGPAALKTFL
GPFHDRDRF
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