Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4253 |
Symbol | metA |
ID | 7386505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3574564 |
End bp | 3575493 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652920 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_002551092 |
Protein GI | 222150135 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATCA AGATTCCCGA TACGCTCCCC GCCTTCGACG CTCTCGTTCA TGAGGGTGTG CGGGTGATGA CGGAAACCGC AGCGATCCGT CAGGATATTC GCCCGTTGCA GATCGCCCTG CTCAATCTCA TGCCCAACAA GATCAAGACC GAGGTGCAAT TTGCCCGGCT GATCGGTGCA TCGCCATTGC AGGTGGAACT GACCCTGGTG CGGATCGGCG GGCATAAGGC CAAGAACACG CCCGAAGAGC ATCTCCTGTC CTTCTACCAG ACCTGGGAAG AGGTGAAGCA CCGCAAGTTC GATGGACTGA TCATTACCGG TGCGCCGGTG GAAACGCTGC CCTTTGAAGA CGTCACCTAT TGGAGCGAGA TGCAGCAGAT TTTCGACTGG ACGCAAACCA ATGTCCACAC GACGATGAAT GTCTGCTGGG GGGCGATGGC GGCGATCTAT CACTTCCACA AGGTGCCGAA ACATGGGCTG AAGGAAAAGG CTTTCGGCGT GTTCCGCCAC CGCAATCTGG CACCCTCCTC CATCTATCTC AACGGCTTCT CGGATGATTT TCAGGTGCCG GTCTCACGCT GGACCGAAGT ACGCCGCGCC GATATCGAAA AAGTGCCGGA CCTGAACATC CTGATGGAAT CCGACGAGAT GGGTGTCTGC CTGGTGCAGG AGGACAAGGG CAATCGGCTC TATATGTTCA ATCACGTCGA ATATGATTCC ACCTCGCTGG CGGATGAATA TTTCCGCGAC GTCAGCGCCG GCATCCCGAT CCGCCTGCCA TATGATTACT TTCCCCACAA CGATGATACA CTGACGCCGC TCAACCGCTG GCGCAGCCAT GCGCATCTGC TGTTTGGAAA CTGGATCAAC GAAATGTATC AGACCACCAG CTATGATTTG AACGATATCG GCAAGGGGCG CGGCATATGA
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Protein sequence | MPIKIPDTLP AFDALVHEGV RVMTETAAIR QDIRPLQIAL LNLMPNKIKT EVQFARLIGA SPLQVELTLV RIGGHKAKNT PEEHLLSFYQ TWEEVKHRKF DGLIITGAPV ETLPFEDVTY WSEMQQIFDW TQTNVHTTMN VCWGAMAAIY HFHKVPKHGL KEKAFGVFRH RNLAPSSIYL NGFSDDFQVP VSRWTEVRRA DIEKVPDLNI LMESDEMGVC LVQEDKGNRL YMFNHVEYDS TSLADEYFRD VSAGIPIRLP YDYFPHNDDT LTPLNRWRSH AHLLFGNWIN EMYQTTSYDL NDIGKGRGI
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