| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4229 |
|---|
| Symbol | |
|---|
| ID | 7386984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 3556445 |
|---|
| End bp | 3556900 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643652902 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002551075 |
|---|
| Protein GI | 222150118 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000114025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA GCGATGACAT GCAACTGCTC TCATCCCTGG CGCTGTTTCA GGGGCTGGAG
CCGGACCAAT TGCGGCTGAT TGCCTTTGGT GCCGAACACA GGCCCATTGG CCAGGGCCAG
CCGCTGTTTC GGGAACACTC CCCGGCTGAA TGCGCCTATG TGGTGGTGCG GGGCCGGTTC
GAGCTTTCCA ACACAGGTCG CGATGGCAAG CCGCAAGTCG CCGCTGTTGC CGGTCCCGGC
ACCATGCTGT CGGAACTGGC GCTGGCCACC ATGGTGGAGC GCAAATATAC CGCCATCGCC
CTGGAAGATG CCGAAGTGCT GCGCATTCCC CGCCCGCTGT TCCACCGGCT GCTGGAGGAA
TATCCAAAGC TCGGCCTTGT CATGCAGGAG CGCATCCGGC AAAACCTCAT GGCACTGGCG
ACCGGTGCAA AGGGGATGGA AGAGCGGTTT CGGTAA
|
|---|
| Protein sequence | MALSDDMQLL SSLALFQGLE PDQLRLIAFG AEHRPIGQGQ PLFREHSPAE CAYVVVRGRF
ELSNTGRDGK PQVAAVAGPG TMLSELALAT MVERKYTAIA LEDAEVLRIP RPLFHRLLEE
YPKLGLVMQE RIRQNLMALA TGAKGMEERF R
|
|---|
| |