| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4204 |
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| Symbol | tyrA |
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| ID | 7386967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3540273 |
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| End bp | 3540605 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643652885 |
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| Product | chorismate mutase |
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| Protein accession | YP_002551058 |
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| Protein GI | 222150101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.47894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCTTC CCGTGTTTGA TACCGCCATC AGACAGGAAC TTGCCGGTTA CCGCCAGTCG
ATTGACAATA TCGACGCGGC ACTGGTGCAT ATGCTGGCCG AACGCTTCCG CTGCACACAG
GCAGTCGGCG TGCTGAAAGC CAAATACGAC CTTCCAGCCG CCGATCCAGC GCGGGAGGAA
TACCAGATTG AACGTTTGCG GCAGCTTGCC AAGGACGCCC AACTCGACCC GGATTTTGCC
GAGACTTTCC TGAATTTCAT CATCAAGGAA GTTATCCGGC ATCATGAAGC CATTGCGGCT
GAACATAGCA GTCAAACGGA ACAGACCGCC TGA
|
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| Protein sequence | MSLPVFDTAI RQELAGYRQS IDNIDAALVH MLAERFRCTQ AVGVLKAKYD LPAADPAREE
YQIERLRQLA KDAQLDPDFA ETFLNFIIKE VIRHHEAIAA EHSSQTEQTA
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