| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4136 |
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| Symbol | sdhD |
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| ID | 7386913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3488197 |
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| End bp | 3488577 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643652831 |
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| Product | succinate dehydrogenase hydrophobic membrane anchor |
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| Protein accession | YP_002551004 |
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| Protein GI | 222150047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
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| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATGC GTACACCGCT CGGTAAAGTT CGCGGTCTCG GCTCCGCAAA GGACGGCACG
GAACATTTCT GGCGCCAGCG CCTGACGGCC ATCGCCAACG TGCCGCTCAT GCTGTTCTTC
ATCATTTTCA TGCTGACCCA TGCCGGCGCA CCCTATGCCG ATGTCGTGTC CGCTTTGTCG
AACCCTCTCG TGGCGGTTAT CATGGGACTG GTCGTGCTTT CCGGCCTGAT CCACATGAAG
ATCGGCATGC AGGAAATCAT CGCCGACTAT ATTCATAACG AAGTTATGAA GATGGGGCTG
ATGATGCTCA ACACATTTTT CGTGGTCATC ACGGGTGCGC TCTGTCTTTT CGCCATCCTC
AAGATCGCGT TTGTAGGATA A
|
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| Protein sequence | MDMRTPLGKV RGLGSAKDGT EHFWRQRLTA IANVPLMLFF IIFMLTHAGA PYADVVSALS
NPLVAVIMGL VVLSGLIHMK IGMQEIIADY IHNEVMKMGL MMLNTFFVVI TGALCLFAIL
KIAFVG
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