| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4121 |
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| Symbol | sucB |
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| ID | 7388913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3475181 |
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| End bp | 3476413 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652821 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_002550994 |
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| Protein GI | 222150037 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTG AAATCCGCGT CCCCACTCTG GGTGAATCCG TCAGCGAAGC CACCGTCGGC
ACCTGGTTCA AGAAAGTCGG CGATGTCGTC AAGGCGGACG AGCCGCTCGT GGAACTGGAA
ACCGACAAGG TAACGGTTGA AGTCCCTTGT CCTGCTTCGG GCGTTCTGAC CGAAATCGTT
GCCCAGAACG GTGAAACGGT TGGTCTTGGC GCTCTGCTCG GCCAGATCGC CGAAGGCGCA
TCGGCTGGTG CGGCTGCACC TGCTGCTGCT GCCCCGGCGC CTGCTGCTAC ACCTGCACAG
GCGGCCCCTG CCGCTCCGGC TGCGGGTTCT GCCATGCCGG CAGCGCCTGC CGCAGCCAAG
ATGCTCGCTG AAAACAATAT CTCTGCCGAT CAGGTGGATG GCTCCGGCAA GCGTGGCCAG
GTGCTGAAGG GCGATGTAAT CGCCGCCGTT GCAAAGGGTG CATCGGCGCC TGCCGCTGCT
CCGGCCCCGG CCCCGGTCGC TGCGCCGCGT CCGGTCTCCT CCGCCGACGA TGCGTCGCGC
GAAGAGCGCG TCAAGATGAC CCGCCTGCGC CAGACCATCG CCAAGCGCCT GAAGGATGCG
CAGAACACGG CTGCCATGCT GACCACCTAT AACGAGGTGG ATATGTCGGC GGTGATGAGC
CTGCGCAACA AATACAAGGA CATTTTCGAA AAGAAGCATG GCGTCAAGCT GGGCTTCATG
GGCTTCTTCA CCAAGGCCGT CACCCATGCC CTGAAGGAAC TGCCTGCCGT CAACGCTGAG
ATCGACGGCA CCGATATCAT CTACAAGAAC TACTGCCATG TCGGCATGGC CGTCGGAACC
GACAAGGGCC TGGTCGTTCC TGTGATCCGC GATGCCGACC AGATGTCGAT TTCGGAAGTC
GAAAAGGATC TCGGTCGTCT TGCCAAGGCT GCCCGCGATG GCTCGCTCTC AATGGCTGAC
ATGCAGGGCG GCACGTTCAC CATCACCAAT GGCGGCGTCT ACGGTTCGCT GATGTCCTCG
CCGATCCTCA ATGCGCCGCA ATCCGGTATC TTGGGCATGC ACAAGATCCA GGATCGTCCG
GTCGTGGTTG GTGGCCAGAT CGTCATCCGC CCGATGATGT ATCTGGCACT GTCCTATGAC
CACCGGATTG TTGACGGCAA GGAAGCCGTG ACCTTCCTCG TGCGCGTCAA GGAAAGCCTG
GAAGATCCGG AACGTTTGGT TCTCGACCTC TAA
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| Protein sequence | MATEIRVPTL GESVSEATVG TWFKKVGDVV KADEPLVELE TDKVTVEVPC PASGVLTEIV
AQNGETVGLG ALLGQIAEGA SAGAAAPAAA APAPAATPAQ AAPAAPAAGS AMPAAPAAAK
MLAENNISAD QVDGSGKRGQ VLKGDVIAAV AKGASAPAAA PAPAPVAAPR PVSSADDASR
EERVKMTRLR QTIAKRLKDA QNTAAMLTTY NEVDMSAVMS LRNKYKDIFE KKHGVKLGFM
GFFTKAVTHA LKELPAVNAE IDGTDIIYKN YCHVGMAVGT DKGLVVPVIR DADQMSISEV
EKDLGRLAKA ARDGSLSMAD MQGGTFTITN GGVYGSLMSS PILNAPQSGI LGMHKIQDRP
VVVGGQIVIR PMMYLALSYD HRIVDGKEAV TFLVRVKESL EDPERLVLDL
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