Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4108 |
Symbol | atpA |
ID | 7388903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3462220 |
End bp | 3463746 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643652811 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_002550984 |
Protein GI | 222150027 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCC GCGCCGCGGA AATTTCCGCA ATTCTGAAAA ATCAAATCAA GAACTTTGGC CAGGACGCTG AAGTTTCCGA AGTCGGCCAG GTTCTGTCCG TCGGTGACGG TATTGCCCGC GTCTACGGTC TGGACAATGT TCAGGCCGGT GAAATGGTCG AGTTTCCCGG TGGTATCCGG GGCATGGCGC TGAACCTCGA ATCCGACAAT GTCGGCGTGG TTATCTTCGG CTCCGACCGC GACATCAAGG AAGGCGACAC CGTTAAGCGG ACAGGCGCCA TCGTTGAAGT TCCTGTTGGT CCTGAGCTGC TGGGTCGCGT TGTTGACGCT CTCGGCAATC CGATTGACGG CAAAGGTCCG ATCAACTCGG CAATCCGTTC GCGCGTTGAC GTCAAGGCTC CTGGCATTAT TCCGCGTAAG GGCGTTCATG AGCCGATGTC GACGGGCATC AAGGCCATCG ATGCTCTGAT TCCGGTTGGC CGCGGCCAGC GCGAGTTGGT CATTGGCGAC CGTCAGACCG GCAAGACCGC CATCATTCTC GACACCTTCC TCAATCAGAA GCCTGCACAT GATGCTGGTG GCGATGACAA GATGTTCTGC GTTTACGTGG CTATCGGCCA GAAGCGCTCC ACCGTTGCCC AGTTCGTCAA GGTTTTGGAA GAGCGTGGCG CTCTGAAATA CTCCATCATC ATCGCGGCAA CCGCTTCTGA TCCTGCTCCT ATGCAGTATC TGGCTCCGTT CGCTGGCTGC ACGATGGGCG AATATTTCCG CGATAAGGGC CAGCACGCCC TGATCGCTTA CGACGACTTG TCCAAGCAGG CTGTTGCTTA CCGTCAGATG TCGCTGTTGC TGCGTCGTCC TCCGGGCCGC GAAGCTTATC CTGGTGACGT TTTCTATCTG CATTCGCGTC TGCTTGAGCG TGCTGCCAAG CTCTCCGACG AGCGTGGCGC TGGTTCGCTC ACCGCTCTGC CGGTGATTGA AACCCAGGGC AACGACGTGT CGGCTTTCAT TCCGACCAAC GTGATTTCGA TCACCGACGG CCAGATCTTC CTTGAAACCG ACCTGTTCTA TCAGGGCATT CGTCCCGCTG TGAACGTTGG TCTGTCGGTT TCGCGCGTTG GTTCTGCCGC TCAGATCAAG GCCATGAAGC AGGTTGCTGG TTCGATCAAG GGCGAGCTTG CCCAGTATCG TGAAATGGCC GCCTTCGCCC AGTTCGGTTC CGACCTTGAT GCTGCCACGC AGCGCTTGCT GAACCGTGGT GCGCGCCTTA CCGAACTTCT GAAGCAGCCG CAGTTCTCCC CGTTGAAGGT GGAAGAGCAG GTTGTTGTGA TTTTCGCGGG TGTCAACGGA TATCTCGATA AGCTTGCCGT CAGTGATGTC GGTCGATTTG AGCATGGCGT GCTTTCCTAT CTCCGGACAG AAGGCAAGGA CATCCTTGAT GCAATCCGCA CGGAGAAGGC TATCAGCGAT GACGTCAAGG GCAAGCTCAA GGCTGCTCTC GATACGTTCG CAAAGTCTTT CGCCTAA
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Protein sequence | MDIRAAEISA ILKNQIKNFG QDAEVSEVGQ VLSVGDGIAR VYGLDNVQAG EMVEFPGGIR GMALNLESDN VGVVIFGSDR DIKEGDTVKR TGAIVEVPVG PELLGRVVDA LGNPIDGKGP INSAIRSRVD VKAPGIIPRK GVHEPMSTGI KAIDALIPVG RGQRELVIGD RQTGKTAIIL DTFLNQKPAH DAGGDDKMFC VYVAIGQKRS TVAQFVKVLE ERGALKYSII IAATASDPAP MQYLAPFAGC TMGEYFRDKG QHALIAYDDL SKQAVAYRQM SLLLRRPPGR EAYPGDVFYL HSRLLERAAK LSDERGAGSL TALPVIETQG NDVSAFIPTN VISITDGQIF LETDLFYQGI RPAVNVGLSV SRVGSAAQIK AMKQVAGSIK GELAQYREMA AFAQFGSDLD AATQRLLNRG ARLTELLKQP QFSPLKVEEQ VVVIFAGVNG YLDKLAVSDV GRFEHGVLSY LRTEGKDILD AIRTEKAISD DVKGKLKAAL DTFAKSFA
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