| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4081 |
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| Symbol | |
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| ID | 7388882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3431418 |
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| End bp | 3433088 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652790 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550963 |
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| Protein GI | 222150006 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGTTCGAC AGGGCCGACC CCGCGGGGAT TGGCAATTGG TTCAGCACGC TGAGGCAGAA
CGGACAGGTG GATCGCAGGC TGGCAGCTTG CGGGACCGGC TGAATTTTGC CGGCCTGGAC
CAGGATGCTT GCAGTCTTTT GCGACGCCAC CGGGTTGGGC TGGAGACTGA CGTGGAAACG
GGTCTGCACG CGTTTTTTCG CAAGTTGCAG ACGGCACCCG ATGCGGCCCG CCAGTTTACC
GGCGAGCGGC AGATCGACCG CCTCCATGAT CTCTATGTTT CCCATTGGGA CGTGATGACC
GACGCGCGTT TCGATGCGCT CTATGCCGAA CGTGTCAAAG TGCTGGCTGA TAGCCAAAGC
CGGATGGGGC TTGATCCCCG TTGGCAGATT GCCGGCCATG CCGTTGTTCT GGAGGGCCTG
GTCAGTTCCG TCTTCGCCGA TCTTGCCAAT CGCGGTTTCA TGCCGTCCTC GCGCAAGCGG
GCAGCCGAAT TGCAGGCGCT GGTCAGCGCG CTCATTCGCC TGGTCATGGT GGATGTGGAG
ATTGCCGTTT CCCTGCGCTT CAACGAATTG CGCCTCAAGC ATCATCGCGA CATGGCCGAC
CTGCGGCGTA AGGAGCGCGC CAGCGTCACG GATCTGTTCC AAGGCGCATT CACGGCGCTG
TCGCAGGGCG ATCTGTCCAG CCGGCTGAAC AGTGATGTCC CCGAGGAATA TCAGGATCTC
GTGTCGAGTT TCAATGGCGC GATGGAGAGC ATTTGCGCTG CGGTTTCCGT GATGGACGCC
AGCCGCCGCA CGGCGGAGGA CGTCAGCGCT GCCCTTGGCG AGCAAGGATC CGCGCTGGGT
GTGCGGGCCG ATGAGGCCGC AGCGGGCCTT GATGCGGCAA GTGCCAGCCT GCGGCAGGTG
ACCGAAACAG TCAGCCATAA CGCGGCGCAG TCGAAACTCA CCGAGCAGGC TGTCGAGATG
ACCGTCAAGG CGGTCGAAGC GAGCGGCGAG GTGGTTGGTA AGGCCATCGC CGCCATGGCG
GATATCGAAA CCTCCGCCGA GCAGATCGGC CATATTATCG GCTCCATCGA TGAAATTGCC
TTCCAGACCA ACCTTCTGGC CTTGAACGCC GGCATCGAGG CGGCTCGCGC CGGTGATTCT
GGTCGGGGCT TTGCCGTCGT TGCCCAGGAA GTACGGGCTT TGGCCCAGCG GTCCGCCGAC
AGTGCGCGTG AAATCAAGGC TCTGGTTGCG GCCACCAAGC ATCAGGTCGA GGCCGGGGTG
GAGATGGTCA ATCGCACCCA GGATGCGATT TCCAGCATCG TGACGCAGGT GGTCGATATC
AATCGGTCGG TCTCGGTGAT GGCTGGCGAG ACGGCCAAGC AGGCCGCAGC CCTGGATAGC
GTCGCTTGCG TGCTCGAAGC CCAGGGCGAA ACATCGCGTG CAAGCGCACA GTTGTCACGT
CAGGCTGCGG ATGACAGTGC CGATCTGCAT ACGGTGATCG TCGAGCTTGG CAAGACCGTG
CGGCAATTCA CCATTGAGCG CACGCACTAT CGGGGCAGCC AGACCAATCC GTCGAACGGT
TATCCGGTGT CATCAGCGCA AACGGCAGAG CTGCCGATGG CGGCTTTTTC CGAGGACTTC
GGGGGGCACG ATTTTTTAGT GCCGATTCGG GCAGGAGGCC TTTCGATGTG A
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| Protein sequence | MVRQGRPRGD WQLVQHAEAE RTGGSQAGSL RDRLNFAGLD QDACSLLRRH RVGLETDVET
GLHAFFRKLQ TAPDAARQFT GERQIDRLHD LYVSHWDVMT DARFDALYAE RVKVLADSQS
RMGLDPRWQI AGHAVVLEGL VSSVFADLAN RGFMPSSRKR AAELQALVSA LIRLVMVDVE
IAVSLRFNEL RLKHHRDMAD LRRKERASVT DLFQGAFTAL SQGDLSSRLN SDVPEEYQDL
VSSFNGAMES ICAAVSVMDA SRRTAEDVSA ALGEQGSALG VRADEAAAGL DAASASLRQV
TETVSHNAAQ SKLTEQAVEM TVKAVEASGE VVGKAIAAMA DIETSAEQIG HIIGSIDEIA
FQTNLLALNA GIEAARAGDS GRGFAVVAQE VRALAQRSAD SAREIKALVA ATKHQVEAGV
EMVNRTQDAI SSIVTQVVDI NRSVSVMAGE TAKQAAALDS VACVLEAQGE TSRASAQLSR
QAADDSADLH TVIVELGKTV RQFTIERTHY RGSQTNPSNG YPVSSAQTAE LPMAAFSEDF
GGHDFLVPIR AGGLSM
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