Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4044 |
Symbol | |
ID | 7388854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3403752 |
End bp | 3404771 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652761 |
Product | hypothetical protein |
Protein accession | YP_002550935 |
Protein GI | 222149978 |
COG category | [S] Function unknown |
COG ID | [COG4246] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.948145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGAGTGCGT GTGATCTGTT GCTAATCACC TCCCGCAAAG CCTTGGCTGC CTTCTGCTGC GGCTCCGCGC TGCTTTTGGC AGCATCTCAG GCCGTGGGTG AGTCTGCGGC GGTGAGTAGC CGAAAAATTG AATATTTCAA TCCGGCCTCG GACCAGACCG TGTTCGGCAA GCTGGAATTT CTCGGTGGGC TGGACCTGAC ATCGTCAGAC AGTCTGTTCG GTGCCTGGTC TTCGATCCGG TTTCGACCGG ATGGCAAGCG TTTCATTGGC GTGCTGGACA CTGGTCACTG GATTTCCGGC GAAATCAAAC GAGATGAAAA GGGTCGCCTT TCCGGCATCG ATGGTGTGTC GCTGGCTCCG ATGCTGGACC GCGAAGGCCG CAGCAATGCG CCGAAGCGGG CGATGGATGC CGAGAGCCTG GCGATCCGTG GCGACAAGAT CTATGTCGGC TTTGAGCAAC GCCATCGGAT CGATCAATAT CCACTCGACG GATTTGAAAC GGCCAAGCCG GAAAAAAGCC TGCCTTTGCC TTTTCCCAAG ACGGTCCTGA AGAGCAATCG CAGCCTGGAA ATGCTGACAG CATCGCCTGC GCAAGGGCCG CTTGCCGGTG GCCTGGTAAC GATCACCGAG GAGAGCCTGG ACGCCAAGGG TAATCTCTAT GCTGGCGTGG TCGATGGTCC GCATCCAGGC GGCTTCAAGC TGGTGCGCCG TGACGATTTT GACGTCACTG ACGGCGCATG GCTGCCGGAT GGCGATCTGC TGCTCTTGGA GCGGCGGTTC CGGTTTCCCA GTGGGCTGGG GATGCGCGTC GTGCGCGTCA AGGGCGACAG CATCAAGCCG GGCGCGTTGG TGGATGGTGA GATCCTGCTC GAGGCCGATC AAACCTTCCA GATCGACAAT ATGGAAGGCC TGGATGTGGT GGATATGGGC AATGGCGACC TTCGCCTGAT CCTGGTCTCT GACGACAACC ACTTCATGTT GCAACGGACG TTGATGCTGG AATTCCGGCT GCTACCGTAA
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Protein sequence | MSACDLLLIT SRKALAAFCC GSALLLAASQ AVGESAAVSS RKIEYFNPAS DQTVFGKLEF LGGLDLTSSD SLFGAWSSIR FRPDGKRFIG VLDTGHWISG EIKRDEKGRL SGIDGVSLAP MLDREGRSNA PKRAMDAESL AIRGDKIYVG FEQRHRIDQY PLDGFETAKP EKSLPLPFPK TVLKSNRSLE MLTASPAQGP LAGGLVTITE ESLDAKGNLY AGVVDGPHPG GFKLVRRDDF DVTDGAWLPD GDLLLLERRF RFPSGLGMRV VRVKGDSIKP GALVDGEILL EADQTFQIDN MEGLDVVDMG NGDLRLILVS DDNHFMLQRT LMLEFRLLP
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