Gene Avi_4044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4044 
Symbol 
ID7388854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3403752 
End bp3404771 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content59% 
IMG OID643652761 
Producthypothetical protein 
Protein accessionYP_002550935 
Protein GI222149978 
COG category[S] Function unknown 
COG ID[COG4246] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.948145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGAGTGCGT GTGATCTGTT GCTAATCACC TCCCGCAAAG CCTTGGCTGC CTTCTGCTGC 
GGCTCCGCGC TGCTTTTGGC AGCATCTCAG GCCGTGGGTG AGTCTGCGGC GGTGAGTAGC
CGAAAAATTG AATATTTCAA TCCGGCCTCG GACCAGACCG TGTTCGGCAA GCTGGAATTT
CTCGGTGGGC TGGACCTGAC ATCGTCAGAC AGTCTGTTCG GTGCCTGGTC TTCGATCCGG
TTTCGACCGG ATGGCAAGCG TTTCATTGGC GTGCTGGACA CTGGTCACTG GATTTCCGGC
GAAATCAAAC GAGATGAAAA GGGTCGCCTT TCCGGCATCG ATGGTGTGTC GCTGGCTCCG
ATGCTGGACC GCGAAGGCCG CAGCAATGCG CCGAAGCGGG CGATGGATGC CGAGAGCCTG
GCGATCCGTG GCGACAAGAT CTATGTCGGC TTTGAGCAAC GCCATCGGAT CGATCAATAT
CCACTCGACG GATTTGAAAC GGCCAAGCCG GAAAAAAGCC TGCCTTTGCC TTTTCCCAAG
ACGGTCCTGA AGAGCAATCG CAGCCTGGAA ATGCTGACAG CATCGCCTGC GCAAGGGCCG
CTTGCCGGTG GCCTGGTAAC GATCACCGAG GAGAGCCTGG ACGCCAAGGG TAATCTCTAT
GCTGGCGTGG TCGATGGTCC GCATCCAGGC GGCTTCAAGC TGGTGCGCCG TGACGATTTT
GACGTCACTG ACGGCGCATG GCTGCCGGAT GGCGATCTGC TGCTCTTGGA GCGGCGGTTC
CGGTTTCCCA GTGGGCTGGG GATGCGCGTC GTGCGCGTCA AGGGCGACAG CATCAAGCCG
GGCGCGTTGG TGGATGGTGA GATCCTGCTC GAGGCCGATC AAACCTTCCA GATCGACAAT
ATGGAAGGCC TGGATGTGGT GGATATGGGC AATGGCGACC TTCGCCTGAT CCTGGTCTCT
GACGACAACC ACTTCATGTT GCAACGGACG TTGATGCTGG AATTCCGGCT GCTACCGTAA
 
Protein sequence
MSACDLLLIT SRKALAAFCC GSALLLAASQ AVGESAAVSS RKIEYFNPAS DQTVFGKLEF 
LGGLDLTSSD SLFGAWSSIR FRPDGKRFIG VLDTGHWISG EIKRDEKGRL SGIDGVSLAP
MLDREGRSNA PKRAMDAESL AIRGDKIYVG FEQRHRIDQY PLDGFETAKP EKSLPLPFPK
TVLKSNRSLE MLTASPAQGP LAGGLVTITE ESLDAKGNLY AGVVDGPHPG GFKLVRRDDF
DVTDGAWLPD GDLLLLERRF RFPSGLGMRV VRVKGDSIKP GALVDGEILL EADQTFQIDN
MEGLDVVDMG NGDLRLILVS DDNHFMLQRT LMLEFRLLP