| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4015 |
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| Symbol | hbdA |
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| ID | 7387345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3380694 |
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| End bp | 3381566 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652736 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_002550910 |
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| Protein GI | 222149953 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA ATGTTGGAAT TGTCGGCGCG GGACAGATGG GCTGCGGCAT TGCCTATGTC
TCGTCGCTTT CCGGTTACGA TGTCACGCTT TATGACCTGA GCAAGGAACG GATTGAAGCC
GGGCTTGCCA CCATCAACGG CAACATGGCC CGCCAGGTTG CCAATGGCAA GATGGAGGAT
AGCGAGCGCA AGGCAGCTCT CGCTCGCATT TCCGGCGTCA CCGATGTGCA GGATCTGGCC
CAGGTGGACC TGGTGATTGA GGCGGCCACC GAGGATGAAA GCGTCAAGCG CAAGATTTTC
GGCCAGATCT GCCCGGTGCT AAAGCCCGAA GCGCTGCTGG CCACCAATAC GTCCTCGCTG
TCCATCACCC GGCTTGCGGC ATCCACGGAC CGCCCGGAAC GTTTCATGGG CATCCATTTC
ATGAACCCGG TCCCGGTGAT GAAGCTGGTG GAACTGGTGC GCGGCATTGC CACCGGTGAA
AAGACCTTTG AGACCGCCAA GGACTTCGTG CGGTCGCTGG ACAAGACCAT AACCGTCGCC
GAGGATTTTC CCGCCTTCAT CGTCAACCGC ATCCTGCTGC CGATGATCAA CGAGGCGATC
TACACGCTCT ATGAAGGGGT CGGTTCGGTC GAGGCCATCG ATACCGCCAT GAAGCTCGGC
GCCAATCATC CGATGGGACC GTTGCAGCTC GCCGATTTCA TCGGTCTCGA TACTTGCCTG
TCAATCATGC AGGTTCTGCA TGACGGCTTG GCCGACAGCA AATATCGCCC CTGCCCGCTG
CTGGTCAAAT ATGTGGAAGC GGGATGGCTT GGACGCAAGT CAGGCCGCGG CTTCTACGAT
TACCGCGGCG AAATCCCGAT TCCGACGCGG TAA
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| Protein sequence | MIKNVGIVGA GQMGCGIAYV SSLSGYDVTL YDLSKERIEA GLATINGNMA RQVANGKMED
SERKAALARI SGVTDVQDLA QVDLVIEAAT EDESVKRKIF GQICPVLKPE ALLATNTSSL
SITRLAASTD RPERFMGIHF MNPVPVMKLV ELVRGIATGE KTFETAKDFV RSLDKTITVA
EDFPAFIVNR ILLPMINEAI YTLYEGVGSV EAIDTAMKLG ANHPMGPLQL ADFIGLDTCL
SIMQVLHDGL ADSKYRPCPL LVKYVEAGWL GRKSGRGFYD YRGEIPIPTR
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