Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3979 |
Symbol | argJ |
ID | 7387320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3348840 |
End bp | 3350081 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652710 |
Product | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein |
Protein accession | YP_002550885 |
Protein GI | 222149928 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) |
TIGRFAM ID | [TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGCCA GTGTTTCTCC TCTCGCGCCA AAGAGTTTTG CCGAAATGCC CGCGATCCGC GGCGTCTCCA TGGCAACAGC TGCGGCGGGC ATTAAATACA AGAACCGTAC CGATGTGCTG TTGATGGTGT TCGACCAGCC TGCCAGCGTT GCGGGCGTGT TTACCCGGTC CAAATGCCCA TCCGCACCAG TGGATTTCTG CCGGAAAAAC CTGGCCCATG GCGTGGCACG CGGCGTGGTG GTCAATTCCG GAAATGCCAA TGCCTTTACC GGCACCAAGG GCCGGGCTGC GACCGAGTTG ACGGCCAAAT CGGCGGCATC GGCGCTCAAC TGCGGTGAAG ATGAAATTTA TCTGGCCTCG ACCGGCGTGA TCGGCGAACC TCTGGATGCA ACGAAATTTG CCGGCGTGCT TGATGACATG GCCCGTGACG CCAAGGGCGA TTTCTGGCTG GAAGCCGCCA AGGCGATCAT GACCACGGAT ACCTATCCGA AGGTTGCGAC CCGCAGCACT GAGATCGGCG GCGTCACTGT GACCATCAAT GGCATTGCCA AGGGTGCTGG CATGATCGCG CCTGATATGG CGACCATGCT GTCCTTCGTC GTCACCGATG CCGATATCGC ACCGGCTGCC TTGCAGGCGC TGTTGTCGGC GGGTGTCGGT CCAAGCTTTA ATTCCGTCAC GGTTGATAGT GACACCTCGA CCTCCGATAC GTTGATGCTG TTTGCGACCG GCGCTGCGGC CAGTGATGGT CAGCAGCGGG TTGAGACTGC CGATGACGCC CGTCTTGATG GGTTCCGGGC AGCGCTCAAC GATCTCCTGA AGGATCTGGC CTTGCAGGTG GTGCGGGATG GCGAAGGCGC GCGCAAGATG GTGGAAGTCA CCGTCAAGGG CGCTGAAAGC GACGCGGCTG CCAAGGTGAT TGCCCTTTCG ATTGCCAATT CGCCCTTGGT GAAGACGGCG GTTGCTGGCG AAGACGCCAA TTGGGGCCGC GTGGTCATGG CGGTCGGCAA GGCTGGCGAG CTGGCCGACC GGGATCGTCT GGCGATCTGG TTCGGTGACG TGCGCGTTGC TGTTAACGGT GAGCGTGATC CGGATTATTC GGAAGCCGCA GCCACAGCCG TGATGCAGGG CGAAGACATT CCGGTCACGG TTGAGCTTGG GCTTGGGTCG GGGACAGCCA CGGTCTGGAC CTGCGATCTC ACCAAGGAAT ATGTGGCCAT CAACGGGGAT TATCGGAGCT GA
|
Protein sequence | MSASVSPLAP KSFAEMPAIR GVSMATAAAG IKYKNRTDVL LMVFDQPASV AGVFTRSKCP SAPVDFCRKN LAHGVARGVV VNSGNANAFT GTKGRAATEL TAKSAASALN CGEDEIYLAS TGVIGEPLDA TKFAGVLDDM ARDAKGDFWL EAAKAIMTTD TYPKVATRST EIGGVTVTIN GIAKGAGMIA PDMATMLSFV VTDADIAPAA LQALLSAGVG PSFNSVTVDS DTSTSDTLML FATGAAASDG QQRVETADDA RLDGFRAALN DLLKDLALQV VRDGEGARKM VEVTVKGAES DAAAKVIALS IANSPLVKTA VAGEDANWGR VVMAVGKAGE LADRDRLAIW FGDVRVAVNG ERDPDYSEAA ATAVMQGEDI PVTVELGLGS GTATVWTCDL TKEYVAINGD YRS
|
| |