Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3872 |
Symbol | |
ID | 7388554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3228982 |
End bp | 3230145 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652621 |
Product | hippurate hydrolase |
Protein accession | YP_002550802 |
Protein GI | 222149845 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCATTT TGAACCGTGC CAGCGCCCTG CAGGAAGAGG TCGCAGGCTG GCGGCGCCAT TTGCACCAGA CACCGGAACT GTTGTTCGAT GTGCATCAGA CAGCCGCTTT TGTCACGCAG AAGCTGAAGG AATTCGGCTG CGACGTGGTG GAAACAGGCA TTGGCAGAAC GGGTGTCGTT GGCATCATCA AGGGCAATCG CGGCGAGGGT ACCACCATTG GCATGCGCGC TGACATGGAT GCCTTGCCGA TCACCGAGAT CACTGGCGCG CCATGGGCTT CGACGGTGCC GGGCAAGATG CATGCCTGCG GCCATGACGG CCACACCGCC ATGTTGCTGG GGGCGGCGAA GCATCTGGCG GAAACCCGCA ATTTCGCGGG TTCGGTTGCG GTGATCTTCC AGCCGGCGGA AGAAGGCGGC GGCGGTGGTC TTGCTATGGT GCAGGACGGA ATGATGGAAA AATTCGGCAT TTCCCAAGTG TTCGGCATGC ACAATGCGCC GGGCGTGCCG CTTGGCGATT TCGCCATTCG CAAGGGCTCG CTGATGGCGG CGTCCGATAC GTTCGAGATT GTTATCAAGG GCAAGGGCAG CCATGCCGCC CAGCCGCATA TGTCGGTCGA TCCGGTGCTG GTTTCGGCGC ATGTGATCAT TGCCTTGCAA TCGATTGTGT CGCGCGGCGT CGATCCGCTG GAATCGCTGG TTATCAGCGT CACCACCACC CATGGCGGCG ATGCCTATAA TGTTATTCCG ATGGATGTGA CCCTGACCGG CACCGTGCGC ACCCTGCTGC CGCAGATCCG CGATTTTGCC GAAAAGCGCG TGCAGGAAGT GGCAAGCGCC ACGGCCATGG CGCATGGCGC TATCGCCGAA GTGCATTATC ACCGGGGCTA TCCCGTTACC TTCAATCACG CCGAAGAGAC GGATTTTGCC GCCTCGGTTG CTGCCAAGAT CTCTGGTGAA AACCGGGTGA AGACCGATAT GGCGCCGAAA ATGGGCGCCG AGGACTTTTC CTATATGCTG GAAAGCCGTC CGGGCGCCTT CATTTTCTTA GGCGTCGGCG ATACCGCCAA TCTGCACCAC CCGGCCTATG ACTTCAATGA CGAGGCCATT CCTTACGGCA TCAGCTATTG GGTGGAATTG GCCGAAACCG GTTTGGCAGC CTGA
|
Protein sequence | MPILNRASAL QEEVAGWRRH LHQTPELLFD VHQTAAFVTQ KLKEFGCDVV ETGIGRTGVV GIIKGNRGEG TTIGMRADMD ALPITEITGA PWASTVPGKM HACGHDGHTA MLLGAAKHLA ETRNFAGSVA VIFQPAEEGG GGGLAMVQDG MMEKFGISQV FGMHNAPGVP LGDFAIRKGS LMAASDTFEI VIKGKGSHAA QPHMSVDPVL VSAHVIIALQ SIVSRGVDPL ESLVISVTTT HGGDAYNVIP MDVTLTGTVR TLLPQIRDFA EKRVQEVASA TAMAHGAIAE VHYHRGYPVT FNHAEETDFA ASVAAKISGE NRVKTDMAPK MGAEDFSYML ESRPGAFIFL GVGDTANLHH PAYDFNDEAI PYGISYWVEL AETGLAA
|
| |