Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3844 |
Symbol | |
ID | 7388532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3193477 |
End bp | 3193920 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652599 |
Product | hypothetical protein |
Protein accession | YP_002550780 |
Protein GI | 222149823 |
COG category | [S] Function unknown |
COG ID | [COG5488] Integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.352753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGTACCCT ATCGGTCGCT AGGCCGAAAG GGGTTTCGCA TCATGCTGAT GCTGTCCGGG CTGGTCTGTG TCGGCTATGG CGGGTTTTTC CTGACGACCG GTGCCTGGCC AATCGGGTTT TTCTTCGGGC TGGATTTTCT GCTGCTCTAC GGTGCTTTCC GGCTGAATTA CCGCGCCGCC AAAGCCCGCG AGGAAGTCAC GGTATCACGC ACCGCCATCT CTATCCGCAA ATTCACCCCC TCGGGGCGGA TGACCGAATT TCGCTGGAAC CCGTTCTGGG CGCGGTTCTT TGTCCGCCGC CACGAGGAAT TCGGGATCAT CTCCATGTCG GTGCAGGGGC AAGGCCGGGC CACCGATGTC GGCTCGTTCC TCAATCCCGA TGATCGCGAA AGCTTTGCCA AGGCCTTTCG CGGTGCCTTG GCAACGGTAA CGCAGCGGAT CTGA
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Protein sequence | MVPYRSLGRK GFRIMLMLSG LVCVGYGGFF LTTGAWPIGF FFGLDFLLLY GAFRLNYRAA KAREEVTVSR TAISIRKFTP SGRMTEFRWN PFWARFFVRR HEEFGIISMS VQGQGRATDV GSFLNPDDRE SFAKAFRGAL ATVTQRI
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