Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3820 |
Symbol | |
ID | 7388513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3173488 |
End bp | 3174414 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652580 |
Product | hypothetical protein |
Protein accession | YP_002550761 |
Protein GI | 222149804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTATC GCTTAAGGCC TGACCTGAAG ACAGGCACCG CCATTGCCGG GATGCTGGGC GCGCTTTTGC AGGCTGCCGC AGCCGATCTT GATAGGGGCG CAGAAGCCCA GGCCGACGAA CGGGACCGGG CCGTCCATCT TGCGCGCCGC AAACTGAAGC GCGCCAGAGC TCTCTACCGG CTGATCGCCC CGGCCATTGC CGACCTGCGT CGCCGGGAAA ACCGGCGGAT AGGCGATATT GCCCGCAGCC TTTCAGCACT TCGCGATGCT GCCGCATTGC TGGAAAGTGT CGAGGCGCTT CAAGAAGCAA CCCTCAGCGA TGAAGAAGCC GATGCCCTGC AACAGGCGTG GTCACTCCTG TCCAATCGCC ATGAACGGCT GTCGGCCAAT CTGGAGGCAG GCCAGAGCGC AGTGATGCGC GATGCGGCAG ACGGCTGCCG TGAGGCGGCA GATGTCGCCA TGGGGATTGA GTTCAACGAC CGGCCCGCCA AGGTCGCCCG GATATTTGCC AAGGCCTGGG CCAAGACCTT CAAGCGCGCT GAAGCAGCCA TTGCAGCCTG CCGCGAGGGC AGCGAAGCTG AAAGCTACCA TGCGCTGCGC AAGGCCACCC AGACCTATTG GATGCATTTG TCCTTGCTGC GCGATCTTTG GCCAAGCGCC ATGGAGATGA AACGCAGCGC CGCCAAGCAA CTGGCCGATC TGCTGGGCCA TGAAAATGAC CTGTCGGTGC TGACCTCGGT GCTGGATGAA GACTCAAGTC TGTTTGCTGG CGGCGAAACT TTGTCCCATC TGCTCGCCAT CATCATCCGC CAGCAGCAAA CCCTGCGTCG GCAAGCACTT GAGGCGGCGG ATGCATTGTT TGCCGACGGA CCCGACCTTG AACCGGCCGT CATCGAAGCA TTCTGGCTGC GGGCCGCAGC GCAATAG
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Protein sequence | MAYRLRPDLK TGTAIAGMLG ALLQAAAADL DRGAEAQADE RDRAVHLARR KLKRARALYR LIAPAIADLR RRENRRIGDI ARSLSALRDA AALLESVEAL QEATLSDEEA DALQQAWSLL SNRHERLSAN LEAGQSAVMR DAADGCREAA DVAMGIEFND RPAKVARIFA KAWAKTFKRA EAAIAACREG SEAESYHALR KATQTYWMHL SLLRDLWPSA MEMKRSAAKQ LADLLGHEND LSVLTSVLDE DSSLFAGGET LSHLLAIIIR QQQTLRRQAL EAADALFADG PDLEPAVIEA FWLRAAAQ
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