| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3816 |
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| Symbol | |
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| ID | 7388511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3172218 |
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| End bp | 3172856 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652578 |
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| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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| Protein accession | YP_002550759 |
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| Protein GI | 222149802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA AGACTGACAG ATTGTTGGCG GTGCTCAAGC TTCAGCCAGT TGTTCCCGTG
CTGATCATCG ACGACGTCGA AACCGCCGTG CCGCTGGCCC GGGCGCTGGT GGCCGGTGGG
CTGAAAGCTA TCGAAATCAC CATGCGCACG CCAGCTGCGC TGGAAGCGAT TTCGCGGGTG
GCCGCCGAGG TCGAAGGGGC TGTGGCCGGT GCCGGGACCA TTCTCAACCC CGCCCATTTC
GAAGCCGCGC TGAAAGCCGG GTCGCAGTTT ATCGTCAGCC CCGGCACGAC GCCGGAATTG
CTGGCGGCTG CCGCCGGGTC CGATGTGCCG CTGCTGCCGG GGGCGGCCAC GGCCAGCGAA
GTGATGACCC TGCGCGAAAA GGGCTATGAG GTTCTGAAAT TCTTCCCCGC TGAACAGGCG
GGTGGGGCGG CCTATCTGAA ATCGCTGTCC TCGCCGCTGG CAGGCACGCT GTTTTGCCCG
ACCGGCGGCA TTTCACTCAA GAATGCCCGT GATTATCTGT CGCTGCCCAA CGTGGTCTGC
GTTGGCGGCT CCTGGGTGGC GCCAAAAGAA CTGGTCGCTG CGGGCGATTG GGCAGGCATT
ACCAAGCTGG CCGTTGAGGC CTGCGCGCTG AAGGGCTGA
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| Protein sequence | MTAKTDRLLA VLKLQPVVPV LIIDDVETAV PLARALVAGG LKAIEITMRT PAALEAISRV
AAEVEGAVAG AGTILNPAHF EAALKAGSQF IVSPGTTPEL LAAAAGSDVP LLPGAATASE
VMTLREKGYE VLKFFPAEQA GGAAYLKSLS SPLAGTLFCP TGGISLKNAR DYLSLPNVVC
VGGSWVAPKE LVAAGDWAGI TKLAVEACAL KG
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