| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3799 |
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| Symbol | |
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| ID | 7388250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3158647 |
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| End bp | 3160452 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652566 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550747 |
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| Protein GI | 222149790 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCA GCATATCCTC CACGGTGATC ATTTCCGGCG TGATCCTTGC CGTCGGAGTC
GTCATCACAC TCGCGACAGC CATGCAGACC CTCCAGCGGC TGAAGGTCAA CGGACCGATC
TATCAGCAGA TCGTCGACAG CAAGGACCTG ATCGCCGATA TCCTGCCGCC GCCGCTGTAT
CTGGTCGAGG CTTATTCCCT GATCAATGAG TCAGCGCTTC AGCCGGATAT GGCCGCTATC
AATATCGACC GCCTGAAACT GCTGAAAAGC CAGTATCAGG AACGCCGGGA CTATTGGAAA
GGCACAACCC TGCCTGATGC TCTGCGCAGC AAGTTGCAGC AGGATGTTTT GGTGAAAGGT
GACGCGTTCT GGACACAAAT GGATCAAGCC GTCGTTCCAG CCCTAAGCGG TGCTGATCCG
ACCGTGCTGA AAGCCGCACT CAATGAGTTG AAGGAACGGT TTCACACCCA CGAAGCCGCC
GTTAATCAGT TGGTCGACAT GGGGAATACC TATGGTAAGC TGCGGGAAAC CGAAGCCGCT
ACGGAGACCG CATCGCGCGA AACCTTCAGC TATGCGCTGG GAAGCGCGCT GATCCTCCTC
AGCCTCGCCT CGATTTTCAT CGTTCAACGC CGCGCCCTGT CGCCGCTGCG CCATATGACC
ACGGCGATGA CCGCCATGGC CCATGGCGAT CTCGATACGC CTCCTCCCTA TGCGACCCGC
ACCGATGAAA TCGGCGAAAT CGCCCATGCG CTGTCGATCT TTCGCGATGC CGGCCTGGAA
AAGCGCCGCC TGGAGCAGGA GGCGGATGCC AGCCGCGCCA GCACGGAAGA GCAGCGCCGG
CAGCGTGAGG CCGAGCGGGC CGCCGAGGCG CAAGCCCTGC GCCGCGTGGT CGAAGAACTT
GGCGACGGTC TGCACCGGTT GGCCGAGTGT AACATGCGCA CCACGCTCGA CACGCCGTTC
GATGCCCGGT TCGACACTCT TCGCAGCGAT TTCAACGACT CCATCCTGAC GCTTCAGACC
ACTCTAAAGC AGGTTCTCGA TGAGACCGGC TCTCTGCAAA CCAATAGCCG CGAGATGCGG
GACGCCGCCG ACAGCCTGGC CAAGCGCACC GAGCAACAGG CCGCCGCCCT TGAAGAAACC
GCAGCAGCGC TCGAAGAGGT TGCCTCGACC GTGAAGGCCT CCACCACAAG AACCCGCGAA
ACCCGGATGC TTGTGAAAGA TGCGCGTGAC TGTACCAATT CCTCCAATGA CGTGGTCAAC
AATGCCATTA CCGCCATGCA GCGGATTGAA AGCGTCTCCG GTGAGATCGG CACAATCATC
GGCGTGATCG ATGAGATCGC CTTCCAGACC AACCTTCTGG CGCTGAATGC CGGTGTGGAA
GCTGCCCGCG CTGGGGAAGC CGGCAAGGGC TTTGCCGTGG TGGCCCAGGA AGTGCGCGAA
CTGGCCCAAC GCTCGGCAGG TGCCGCCAAG CAGATCAAAA CGCTGGTGGA TCGTTCCAGC
ACGGAAGTGG CAAGCGGCGT GAAACTGGTA GGAACCGCTG GCGATGCCCT GACCCAGATC
GGCGGCTTTG TCACCAAAAT CGACGATAAT ATCGATGCCA TCACCAAGGC CGCAGAAGAA
CAGGCTATCG GCCTTCAGCA GATCAGCAGT TCGGTCAACA GTCTCGACCA GATGACCCAG
CAGAATGCTG CCATGGTCGA AGAGACCAAT GCCATCAGCC AGACGCTGGC CGACGGCGCC
ATCTCACTGG CAGCCCTCGT CAATCGCTTC CAACTGCCGG CAACCCCCAT GGCCCGGGCG
GCGTGA
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| Protein sequence | MKLSISSTVI ISGVILAVGV VITLATAMQT LQRLKVNGPI YQQIVDSKDL IADILPPPLY
LVEAYSLINE SALQPDMAAI NIDRLKLLKS QYQERRDYWK GTTLPDALRS KLQQDVLVKG
DAFWTQMDQA VVPALSGADP TVLKAALNEL KERFHTHEAA VNQLVDMGNT YGKLRETEAA
TETASRETFS YALGSALILL SLASIFIVQR RALSPLRHMT TAMTAMAHGD LDTPPPYATR
TDEIGEIAHA LSIFRDAGLE KRRLEQEADA SRASTEEQRR QREAERAAEA QALRRVVEEL
GDGLHRLAEC NMRTTLDTPF DARFDTLRSD FNDSILTLQT TLKQVLDETG SLQTNSREMR
DAADSLAKRT EQQAAALEET AAALEEVAST VKASTTRTRE TRMLVKDARD CTNSSNDVVN
NAITAMQRIE SVSGEIGTII GVIDEIAFQT NLLALNAGVE AARAGEAGKG FAVVAQEVRE
LAQRSAGAAK QIKTLVDRSS TEVASGVKLV GTAGDALTQI GGFVTKIDDN IDAITKAAEE
QAIGLQQISS SVNSLDQMTQ QNAAMVEETN AISQTLADGA ISLAALVNRF QLPATPMARA
A
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