Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3761 |
Symbol | glgC |
ID | 7388218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3127228 |
End bp | 3128493 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652534 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_002550715 |
Protein GI | 222149758 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGA CAAAGAGAAT TCAGCCGCTG GCGCGCGATG CCATGGCGTA TGTACTGGCC GGCGGACGGG GCAGCCGCCT TAAGGAGCTG ACCGACCGGC GGGCAAAACC CGCCGTCTAT TTCGGTGGCA AAGCCCGGAT CATCGATTTT GCCCTGTCGA ATGCGCTAAA TTCCGGTATT CGCCGCATTG GCGTCGCCAC CCAGTACAAG GCCCATTCGC TGATCCGCCA CATGCAGCGC GGTTGGGATT TCCTGCGGCC CGAGCGCAAT GAAAGCTTCG ACATCCTGCC CGCCAGCCAG CGCGTTTCCG AAACGCAATG GTATGAAGGC ACGGCAGATG CCGTCTTCCA GAACATCGAT ATTATCGAGC CCTATGGCCC GGAATATATG GTGATCCTGG CGGGCGACCA CGTCTATAAG ATGGACTATG AATTCATGCT CCAGCAGCAT GTTGACAGCG GTGCCGATGT CACGATTGGC TGCATGGAAG TGCCGCGCAT GGAAGCCTCG GCGTTCGGTG TCATGCATGT CGATGACAAG GACCAGATCA TTGCCTTCGT CGAAAAGCCC GCCGATCCAC CGGGCATTCC CGGCAACGAG ACCATGGCGC TGGCCTCGAT GGGCATTTAC GTGTTCCACA CCAAATTTCT GATGGATTGC CTGCGCCGCG ATGCCGCCGA CCCCAATTCC AGCCGGGATT TCGGCAAGGA CATCATTCCC TATATCGTCG AGCATGGCAA AGCCGTGGCG CATCGCTTTG CCTCCTCCTG CGTGCGCTCG GATTTCGAAA AGACCCCCTA TTGGCGCGAT GTCGGCACCA TCGATGCCTA TTGGCAGGCC AATGTTGACC TGACCGACAT CCTGCCGGAA CTGGACATCT ACGACAAATC CTGGCCAATC TGGACCTATG CCGAAATCAA TCCACCGGCA AAATTCGTCC ATGACGATGA AGGCCGCCGC GGTTCGGCAA TTTCCTCTCT CGTCTCGGGG GATTGCATCA TATCCGGCTC GACGCTCTAT CGCAGCCTGC TGTTTACCGG GGTTCGCGCC AATTCCTATT CGAGGTTGGA AGGCGCCGTC ATTCTGCCCA AGGTCACTAT TGGCCGTCAT GCCCGCTTGA CCAATGTGGT GATCGATCAT GGCGTCACCA TTCCCGAAGG GCTGATCGTC GGCGAAGACC CGGAAATCGA CGCCAAGCGC TTCCGCCGCA GTGAAAACGG TATCTGCCTG ATCACCCAGG CAATGCTGGA CAAGCTGGAG CAATAG
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Protein sequence | MTPTKRIQPL ARDAMAYVLA GGRGSRLKEL TDRRAKPAVY FGGKARIIDF ALSNALNSGI RRIGVATQYK AHSLIRHMQR GWDFLRPERN ESFDILPASQ RVSETQWYEG TADAVFQNID IIEPYGPEYM VILAGDHVYK MDYEFMLQQH VDSGADVTIG CMEVPRMEAS AFGVMHVDDK DQIIAFVEKP ADPPGIPGNE TMALASMGIY VFHTKFLMDC LRRDAADPNS SRDFGKDIIP YIVEHGKAVA HRFASSCVRS DFEKTPYWRD VGTIDAYWQA NVDLTDILPE LDIYDKSWPI WTYAEINPPA KFVHDDEGRR GSAISSLVSG DCIISGSTLY RSLLFTGVRA NSYSRLEGAV ILPKVTIGRH ARLTNVVIDH GVTIPEGLIV GEDPEIDAKR FRRSENGICL ITQAMLDKLE Q
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