| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3740 |
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| Symbol | pldB |
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| ID | 7388204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3104754 |
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| End bp | 3105752 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652519 |
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| Product | lysophospholipase |
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| Protein accession | YP_002550701 |
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| Protein GI | 222149744 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.594037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTCATG CCGTGGACGG CAATCCCATT CCCGACAATC ATCACGCCGG CTTTTTCACC
AGTTACGACG GCCTTCGCCT GCGCTATGCG ATCTTCAAGA GCGATATCAG CCCGGCCAAA
GGCACGGTCG TGCTGGTGCA TGGCCGCAGC GAATCCATCG AGAAATATTT TGAAACCATC
CGCGACCTGA CAGCAGCGGG CCTTTGGGTC GCTACCTTCG ACCTGCGCGG CCAAGGCCTG
TCCGACTGGA CACTTCTGCA AAAGTCCTCA AAACCCAGAG GGGATAAGGA AAAACGCTGG
GGCCATGTCC AGCGCTTTTC CGATTATGAG CGGGATCTGG AGCAGTTCCT GGAACAGGTC
GTGCTGCCGG ATTGTCGCCT GCCGTTCTCG ATGATCGCCC ATTCCACCGG TGGATTGATC
GCCCTTGCCG CAGCACCACG GCTGTCCGGA CGCATTTCGC GGCTGGTCCT GTCAGCCCCC
TTTGTCGGCC TGCATGGCGA AGCCCTATCG GCGGCAAAGG TGTTCGCGCT GGCGCGGCTG
GCATCAACGC TCGGGCTTGG CAACCGTCCC TTGTCATCAG CCAGCAAGCC GCACACCTTT
GCCACCAATG TCCTGACCTC GGATGCCGCC CGCTTCGACC GGAATATGGC GATTTTTGCC
GCTGTGCCGG AGTTGTCGAT CAGCGCGCCT TCGGCCCGCT GGCTGCATGA ATGCGCAAAA
GCCATCCGGC GGGTCAACGA TCCCGCCCAT CTGACGGGGA TCACCATTCC CACCCTGTTG
CTCGCCCCGA TGCTGGACGG CGTCGTGCCC TTTAGCGCGC AGGAACACCT GGCCCGGCAT
TTCCGCGCCG CGCAATTGCT GTCCATTCCC GGCGCCCGCC ATGAAGTGTT GCAGGAACAG
GACCGCTACC GCGAACAGGC GCTTGCAGCC ATCCATGCCT TCATTCCCGG CAGCGATCCG
ATGCAGATCG AAGGCGAGGC AGAACTCGTC GGTCTTTGA
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| Protein sequence | MLHAVDGNPI PDNHHAGFFT SYDGLRLRYA IFKSDISPAK GTVVLVHGRS ESIEKYFETI
RDLTAAGLWV ATFDLRGQGL SDWTLLQKSS KPRGDKEKRW GHVQRFSDYE RDLEQFLEQV
VLPDCRLPFS MIAHSTGGLI ALAAAPRLSG RISRLVLSAP FVGLHGEALS AAKVFALARL
ASTLGLGNRP LSSASKPHTF ATNVLTSDAA RFDRNMAIFA AVPELSISAP SARWLHECAK
AIRRVNDPAH LTGITIPTLL LAPMLDGVVP FSAQEHLARH FRAAQLLSIP GARHEVLQEQ
DRYREQALAA IHAFIPGSDP MQIEGEAELV GL
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