Gene Avi_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3720 
Symbol 
ID7388190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3084089 
End bp3085123 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID643652505 
Producthypothetical protein 
Protein accessionYP_002550687 
Protein GI222149730 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCT TCGATATTCT GGTTATTGCC CTGGTGGGCT TCGTCATCCT GGTGCTGATT 
GCCGGGGTCA AGACCGTGCC GCAGGGCTTT CGCTATACGG TGGAACGTTT CGGACGCTAT
ACCCGCACGC TGGAACCGGG CCTCAACATC ATCACACCCT TTATTGAGAC CATCGGTGCC
AGGATGAACG TGATGGAACA GGTGCTGGAT GTTCCGACCC AGGAAGTCAT CACCAAGGAT
AATGCCAGCG TCTCCGCCGA TGCCGTGGCC TTTTATCAGG TCCTGAACGC CGCCGAGGCC
GCCTATCAGG TTGCCAATCT GGAAAACGCC ATTCTCAACC TGACCATGAC CAATATCCGC
TCGGTCATGG GCTCGATGGA TCTCGATGAA CTGCTGTCCA ACCGCGAGGT CATCAACGAC
CGGCTGCTGC GGGTGGTGGA TGAAGCCGTG CGCCCCTGGG GCATCAAGGT CACCCGAGTC
GAGATCAAGG ATATCCAGCC GCCCAAGGAT CTGGTCGATG CCATGGGCCG CCAGATGAAA
GCCGAGCGTG AAAAACGCGC CCTGGTGCTG GAAGCTGAAG GCTTCCGCAA TGCCCAGATT
CTGCGGGCCG AAGGCGCCAA GCAATCCGCC ATCCTCCAGG CCGAAGGCCA GAGGGAAGCC
GCCTATCGCG AGGCCGAGGC CCGCGAACGT TTGGCCGAAG CGGAAGCCAA GGCGACGGCC
CTGGTCTCCG CAGCAATTGC CGCCGGTGAT GTCCAGGCCA TCAACTATTT CGTCGCCCAG
AAATATACCG AGGCGATGAC CGCAATCGGC ACCGCCTCCA ACTCGAAAAT CGTGCTGATG
CCGATGGAAG CGTCATCGCT GATCGGCTCA CTGAGCGGCA TTGGCGCCAT CGCCCGCGAA
GTGTTCGGAG GCGATGCGCC GCAGGCGAGT TCCAACCCGG CTCGTGCCTC TGGCTCACCA
GCCAGAAGCG TTCCGAAAAC CACCACAGTC AGCACTACGC CCGCGATCAA TCCCTTCGCC
AAGTCGGAGG AATAA
 
Protein sequence
MSGFDILVIA LVGFVILVLI AGVKTVPQGF RYTVERFGRY TRTLEPGLNI ITPFIETIGA 
RMNVMEQVLD VPTQEVITKD NASVSADAVA FYQVLNAAEA AYQVANLENA ILNLTMTNIR
SVMGSMDLDE LLSNREVIND RLLRVVDEAV RPWGIKVTRV EIKDIQPPKD LVDAMGRQMK
AEREKRALVL EAEGFRNAQI LRAEGAKQSA ILQAEGQREA AYREAEARER LAEAEAKATA
LVSAAIAAGD VQAINYFVAQ KYTEAMTAIG TASNSKIVLM PMEASSLIGS LSGIGAIARE
VFGGDAPQAS SNPARASGSP ARSVPKTTTV STTPAINPFA KSEE