| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3637 |
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| Symbol | gapA |
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| ID | 7388052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3022721 |
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| End bp | 3023728 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652450 |
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| Product | Glyceraldehyde 3-Phosphate Dehydrogenase |
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| Protein accession | YP_002550632 |
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| Protein GI | 222149675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGTGA AAGTTGCCAT TAACGGCTTT GGCCGTATCG GCCGCAATGT GCTGCGCGGT
ATCATCGAAT CCGGCCGGAC CGACATTGAG GTCGTGGCCA TCAACGATCT TGGCCCGGTC
GAAACCAATG CGCATCTGCT GCGCTATGAT AGCGTCCATG GCCGTTTCCC CTCGACCGTC
AAGGTTGAAG GCGACAGCAT CATCATCGAC GGCCGCGCGC CGATCAAGGT GACCGCGGTT
CGCGATCCCA AGGACCTGCC CTGGAGCAAT GTCGATATCG CGCTGGAATG CACTGGCATT
TTCACCGCCA AGGAAAAGGC ATCGCTGCAC CTGGCCAATG GCTCGAAGCG CGTGCTGGTT
TCGGCGCCTG CTGATGGTGC CGACAAGACC ATCGTTTTCG GCGTCAACCA CAACACGCTG
ACCAAGGACG ACCTGGTCGT TTCCAACGCC TCCTGCACCA CCAATTGCCT GGCACCGGTT
GCCTACGTGC TGCAAAAGCT TGTCGGCATC GAAAGCGGCT ACATGACGAC CATCCATTCC
TACACCGGCG ACCAGCCGAC GCTGGATACG ATGCACAAGG ACCTGCACCG CGCCCGCGCT
GCTGCGCTGT CGATGATCCC GACCTCGACC GGTGCCGCCA AGGCCGTCGG CCTGGTTCTG
CCGGAACTGA AGGGCAAGCT GGACGGTTCG GCCATCCGCG TTCCGACCCC GAACGTCTCG
GTTGTTGACC TGAAGTTCAT CCCCGGTCGC ACGGTCACCA AGGAAGAAAT CAACGCCGCC
ATCAAGGCAG CGTCGGAAGG CGAGTTGAAG GGCATTCTCG GCTATACCGA AGAGCCGCTG
GTTTCCATCG ACTTCAACCA CGACAGCCAT TCCTCGACCT TCTCCGGCGA CCAGACCAAG
GTCATGGACG GCGGCAAGCT GGTGCGCATC CTGTCCTGGT ACGACAACGA ATGGGGCTTC
TCCAACCGCA TGGCCGACAC CGCCGTCGCC ATGGGCAAGC TGATCTAA
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| Protein sequence | MTVKVAINGF GRIGRNVLRG IIESGRTDIE VVAINDLGPV ETNAHLLRYD SVHGRFPSTV
KVEGDSIIID GRAPIKVTAV RDPKDLPWSN VDIALECTGI FTAKEKASLH LANGSKRVLV
SAPADGADKT IVFGVNHNTL TKDDLVVSNA SCTTNCLAPV AYVLQKLVGI ESGYMTTIHS
YTGDQPTLDT MHKDLHRARA AALSMIPTST GAAKAVGLVL PELKGKLDGS AIRVPTPNVS
VVDLKFIPGR TVTKEEINAA IKAASEGELK GILGYTEEPL VSIDFNHDSH SSTFSGDQTK
VMDGGKLVRI LSWYDNEWGF SNRMADTAVA MGKLI
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