Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3603 |
Symbol | |
ID | 7388027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2996064 |
End bp | 2997080 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652425 |
Product | flavin dependant oxidoreductase |
Protein accession | YP_002550607 |
Protein GI | 222149650 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.141561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCTG GAAAAACCGT GCCGATTTCC ATTCTGGACC TGTCGCCCAT CGCTGAAGGG CAGAGCGTGT CGGATGCGCT TTCGGCCTCG CGGCGCATGG CCGTTGCGGC TGAAGAGCAT GGTTATACGC GGTTCTGGCT GGCCGAGCAT CACGGCATGC CGGGCATTGC CAGCGCGGCG ACCTCTATTG TCATTGCCCA TGTCGGGGCG GCGACCAAGC GGATTCGCAT TGGCTCCGGG GGCATCATGC TGCCCAATCA TGCGCCTATG GTGATTGCTG AGCAATTCGG CACGCTCGCG GCGCTGTTTC CGGGCCGGGT CGATCTGGGT CTCGGACGGG CGCCCGGCAC CGATATGCGC ACAGCCCGCG CCTTGCGCCG CAATATGGAG GCGGGCGTGG ATAACTTCCC CCAGGATATC CAGGAGCTGC AATTGCTGCT GGGGCCACCG GTTGGCGATG GCAGCCTGAT GGCGGTGCCC GGTGTGAATA GCGATGTGGC TGTGTGGTTG CTGGGTTCCA GCCTCTATAG CGCCCATCTG GCGGCAGCGC TGGGTCTTCC CTATGCCTTT GCATCGCATT TTGCCCCCGA TCAACTGTTC GAGGCGATTT CGATCTACCG CGACCGCTTC CAGCCATCCG AGGCCCTCGA TAAGCCCTAT ATGATCGTCG GCGTGATGGG CGCGGTCGCC GAGACGGATC AGGAGGCGCG ACGCCTGTTT ACCTCCGCCC AGCAGCAATT CATCAACCTG CGGCGTAATG TGCGCAGCCA GTTTCCTCGC CCGGTAGAGA CCATGGAGGG TCTGTGGAGC GAAATGGAGC GCTTTGGCGT CGAGCATACG CTGCAACATG CTGTGGTCGG CGGCCCGGCG ACAGCGGCTG AAAAGCTATC TCGCTTTCTG AAAAATACCG GCGCTGATGA AGTGATCGTC TCCATGCCGA TCCACGATAT CGAGGCACGG TTGACATCGG TCCGGCTGTT TGCCGATCTG CAGCGTCAGG CATGCGAAGC GGCGTGA
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Protein sequence | MTSGKTVPIS ILDLSPIAEG QSVSDALSAS RRMAVAAEEH GYTRFWLAEH HGMPGIASAA TSIVIAHVGA ATKRIRIGSG GIMLPNHAPM VIAEQFGTLA ALFPGRVDLG LGRAPGTDMR TARALRRNME AGVDNFPQDI QELQLLLGPP VGDGSLMAVP GVNSDVAVWL LGSSLYSAHL AAALGLPYAF ASHFAPDQLF EAISIYRDRF QPSEALDKPY MIVGVMGAVA ETDQEARRLF TSAQQQFINL RRNVRSQFPR PVETMEGLWS EMERFGVEHT LQHAVVGGPA TAAEKLSRFL KNTGADEVIV SMPIHDIEAR LTSVRLFADL QRQACEAA
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