| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3532 |
|---|
| Symbol | |
|---|
| ID | 7388799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2927784 |
|---|
| End bp | 2928092 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643652367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550550 |
|---|
| Protein GI | 222149593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.108786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA GCCGCCCGGA CATGCAGCAC CCCACGCCCG AAGCACTCGA AACGCTTGCC
GACGACTTGC GCCAGCGCAG CGAAGCGCTC AATTCCCGGC TGCTTGCTGG CGATGGTGTC
GAGGAAGACT TGGCCCTGCG CGCGCAAATC GCCGAAATCG CCGCCGGGAT GATCGTGTTC
ACCGCCCGCA AGGAAGGCGA AGCATCGCCG ATTCCGGCCC TGCTGGCACA CCCTGTCCCC
AGCGCCGATG CGCCGCAACC GCTGCTGGAA CGGATCAGGG CGGTAGCGCC GGATCTTCTG
AACGATTGA
|
|---|
| Protein sequence | MSESRPDMQH PTPEALETLA DDLRQRSEAL NSRLLAGDGV EEDLALRAQI AEIAAGMIVF
TARKEGEASP IPALLAHPVP SADAPQPLLE RIRAVAPDLL ND
|
|---|
| |