Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3522 |
Symbol | |
ID | 7388790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2919538 |
End bp | 2920548 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652358 |
Product | hypothetical protein |
Protein accession | YP_002550541 |
Protein GI | 222149584 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.136391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTTATA TCCTGCCCTC CCAGGCCCAG AAACATGTCA CCCATAACGA AGCGCTGCTG GTTCTCGATG CAGTAACGCA GCTTGTGATT GAGGGCACTT TTACCACGCC ACCTACCTCC CCTGCCGCTG GTACCTGTTA CTGGGTTGCC GCCACCGCGA CGGATGCCTG GGCCGGCAAG GAAGCGCATA TCGCCGCCTG GCAGGATGAT AGCTGGGCTT TCCTGGCACC CGCCGACGGT TGGCGCGCTT ATGTCCGTGC GACAGGCCGA TTGCAGACCT ATGACGGCAC GGCCTGGCAG GATCTTGCCC TGCCCGACAC GGCCACCTTT TCCCGGCTTG GTATCAATGC CACGGCTGAT GATACCAACC GGCTGGCAGT GTCGAGCGAT GCCGTGCTTT TCAATCATGC CGGTGGCGAC AACAGGTTCA AACTCAACAA GGCGGGCGAA AGCAATACAG CAACGCTGCT TTACCAATCC AATTGGCAAG GCCGCGCCGA AATGGGGCTG GCCGGGTCGG ACCAGTTCAG CATCAAAGTC TGCAATGACA GTGGCAGTTG GACCACCGCC TTGCTGATTA GCGGCGACGG AACCGTCACC CAGCCCGCAA GACCCGCCGC CAGGGCCGAA CTGACCAGCC CGTCCCTTGC GGTTTCCGGC GGCATGGTCA CCGGCTTTAA CGGGCTGGCC ATCAGTCAGG GCAATGTGCT GCTTGCCACC GCGACGGCAA GCGGCAATGG CCAGAGCCTG AAAGTGCCAG TCGCCGGGCT GTACCTGATC ACTGTCACCC TCTCCACAAC AGCTACCAAC ACCTATACCA CTACCGTAGT GGATAGCGCC CAGACGAGCC TCGCAAAGAT GACTGTCGGC ACCACCGCCG CCGCTACAGA GACCCATGCG ACAGCCCTGA TCACGCTGGA GGCCGGAGCG GAAATCAGCC TTTTGCATAA TGGCACGGCC ACATTTTCCA CCACCGGTGC GGGTGTAAAA TTTTCGATAT TTCTAATATG A
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Protein sequence | MPYILPSQAQ KHVTHNEALL VLDAVTQLVI EGTFTTPPTS PAAGTCYWVA ATATDAWAGK EAHIAAWQDD SWAFLAPADG WRAYVRATGR LQTYDGTAWQ DLALPDTATF SRLGINATAD DTNRLAVSSD AVLFNHAGGD NRFKLNKAGE SNTATLLYQS NWQGRAEMGL AGSDQFSIKV CNDSGSWTTA LLISGDGTVT QPARPAARAE LTSPSLAVSG GMVTGFNGLA ISQGNVLLAT ATASGNGQSL KVPVAGLYLI TVTLSTTATN TYTTTVVDSA QTSLAKMTVG TTAAATETHA TALITLEAGA EISLLHNGTA TFSTTGAGVK FSIFLI
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