| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3510 |
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| Symbol | |
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| ID | 7388780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2909347 |
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| End bp | 2910462 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652348 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002550531 |
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| Protein GI | 222149574 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.533317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT CGCTTCTTTC AGCCGTGGCG CTGACAGCCA TGGTTGCCTT CAGCGGCACC
GCCTGGGCTG ACATCATCGT CGGTGTCGGC GGTCCCCTGA CAGGCCCGAA CGCTGCTTTC
GGCGCACAGC TCCAGAAGGG TGCCGAACAG GCCGCTGCCG ATATCAACGC AGCTGGCGGC
ATCAATGGCG AAAAGATCAA GATCGTGCTC GGCGACGACG TGTCGGATGC CAAGCAGGGC
GTTTCCGTCG CCAACAAATT CGTCGCCGAC GGCGTGAAAT ACGTGATCGG CCACTTCAAC
TCGGGCGTGT CGATCCCGGC TTCTGACGTA TATGCCGAAA ATGGCATTCT GCAGATCACA
CCAGCCTCGA CAAATCCGAA ATTCACCGAG CGCGGCATGT GGAACACGTT CCGCACCTGC
GGTCGCGATG ACCAGCAGGG CGCGGTTGCC GGCAAATACA TTGCTGAAAA GTTCAAGGGC
GTGAAGGTTG CCGTCATTCA TGACAAGACC CCTTACGGTC AGGGCCTTGC TGACGAAACC
AAGAAGGCCA TGAATGGTCT GGGCGTCAAG GAAGTCATCT ACGAAGGCAT CACCCCCGGT
GAGAAGGACT ATTCGGCTCT GATCGCCAAG ATGAAGGAAG CCGGCGTCGG CATCGTTTAC
TTTGGCGGCC TGCACACGGA AGCTGGCCTG ATCCTGCGTC AGATGGCTGA CCAGGGTGTC
AAGGCGACCC TGATGTCGGG CGACGGCATC ACATCGAACG AACTGGCCTC GATTGCTGGC
GACGCCGTCA ATGGTACGCT GATGACCTTC CCGCCGGATC CGCGTAACAA CCCGAACGCC
AAGGACGCGG TCAAGAAATT CCGCGACGCT GGCTTCGAGC CGGAAGCCTA TACGCTGTAT
TCCTACGCTG CCCTGCAGAT CATTGCAGAG GCTGCCAAGG CTGCGGGTTC CACCGATGCG
GAAAAGGTTG CTGAAACCAT GAAGGCCAAG GGTCCGTTCA CGACCGTTAT CGGCTCGATC
GGCTTTGACG CCAAGGGCGA CATCACCCGT CCCGACTACG TGATGTACAC TTGGAAGAAA
GGCCCTGACG GCAAGTATTC CTACTTCGAA AACTGA
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| Protein sequence | MKKSLLSAVA LTAMVAFSGT AWADIIVGVG GPLTGPNAAF GAQLQKGAEQ AAADINAAGG
INGEKIKIVL GDDVSDAKQG VSVANKFVAD GVKYVIGHFN SGVSIPASDV YAENGILQIT
PASTNPKFTE RGMWNTFRTC GRDDQQGAVA GKYIAEKFKG VKVAVIHDKT PYGQGLADET
KKAMNGLGVK EVIYEGITPG EKDYSALIAK MKEAGVGIVY FGGLHTEAGL ILRQMADQGV
KATLMSGDGI TSNELASIAG DAVNGTLMTF PPDPRNNPNA KDAVKKFRDA GFEPEAYTLY
SYAALQIIAE AAKAAGSTDA EKVAETMKAK GPFTTVIGSI GFDAKGDITR PDYVMYTWKK
GPDGKYSYFE N
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