| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3466 |
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| Symbol | |
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| ID | 7387066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2871771 |
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| End bp | 2872478 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652312 |
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| Product | regulator of Biofilm formation Fnr Family |
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| Protein accession | YP_002550495 |
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| Protein GI | 222149538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAAGGAAA AGGACGGTCT GGCCGTGAAC AAGGTTTTGA ATTTGAACAG TCGCGATCGC
AATATTCTGG TAAAATCACC CCTGATGGCC ACGCTCGGCC CGGGCTCTTT AAACCGGATG
CTGGAACTGG CGACAGTGTT GAGCTTCGAG GCGCGCGATA TTCTGTTTCG CGAAGGCGAC
CCTGCCGATT ATTTCTATTG CGTGCTGACC GGCTATGTCC GCCTTTATCG CCTGAACAAG
GACGGTCGCG AAGCCGACAT CCGCATCAGC GGCGGTGGTG ATACCTTTGC CGAAAGCCTG
TTGGCCATGG GCGATACCTA TCACTATAAC GCCCAGGCGG CGGAGCATGT GACCGTGGCG
CGATTTGACC TTGCCAAAGT ACGCCAGCTT GCAGAGCAGG AAAACGACAT TGCCCGTTCA
GTGATCCGCT GCCTGTCCAA TTATCTGCGC AGCACCATGG ATTGCATCGC CAATGACCGA
CTGCAAACCG CTCCGCAACG CGTAGCACAA TATCTGATCG ACAATTGCCC CAATAGCGGC
GGTGCCGTGT CGATCCGCCT GCCCTTCCAG AAAAGCCTGC TGGCCGGCAA GCTGGGCCTT
GCGCCCGAAG CCCTGTCACG CGCTTTTTCC ACCCTGCGGC ACAGCGGCGT CACTGTGCGC
GGCCGGATGG TCCAGATCAA CGATGTCAAC ACACTCCGAC AGATTTGA
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| Protein sequence | MKEKDGLAVN KVLNLNSRDR NILVKSPLMA TLGPGSLNRM LELATVLSFE ARDILFREGD
PADYFYCVLT GYVRLYRLNK DGREADIRIS GGGDTFAESL LAMGDTYHYN AQAAEHVTVA
RFDLAKVRQL AEQENDIARS VIRCLSNYLR STMDCIANDR LQTAPQRVAQ YLIDNCPNSG
GAVSIRLPFQ KSLLAGKLGL APEALSRAFS TLRHSGVTVR GRMVQINDVN TLRQI
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