| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3461 |
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| Symbol | |
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| ID | 7387063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2865326 |
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| End bp | 2866318 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652309 |
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| Product | ABC transporter substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) |
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| Protein accession | YP_002550492 |
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| Protein GI | 222149535 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA AAATCACCAC ACTGCTTATG GCCACCAGCA TTTCCATGCT GGCTATGCAG
GCCCATGCCG CAGACAAGCT GACCCTGCAA TTGAAATGGG TGACACAGGC ACAGTTTGCT
GGCTATTACG TCGCCAAAGA CAAAGGCTTC TATAAGGAAG AAGGCCTTGA TGTGGACATC
AAGCCCGGCG GCCCGGACAT TGCGCCCGCG CAAGTGCTGG CCGGTGGCGG TGCCGATGTG
ATTGTCGATT GGCTGCCATC CGCCTTGGCC ACCCGTGAAA AAGGCGTGCC GCTGGTCAAT
ATCGCCCAGC CGTTCAAACA TTCGGGCATG ATGCTGACCT GTCTCAAGGA AAGCGGCGTT
AAGACGCCTG CCGATTTCAA GGGCAAGACG CTGGGCGTGT GGTTCTTCGG CAATGAATAT
CCGTTCCTGT CCTGGATGGC GCATCTGGGC ATCAAAACCG ATGGCAGTGC TGACGGTGTA
AAGGTGCTGA AACAGGGCTT CAACGTAGAT CCGTTGTTGC AAAAGCAGGC GGCCTGCATT
TCCACCATGA CCTATAATGA ATATTGGCAG GTCATCGATG CCGGTATCAA GCCCGATCAG
TTGATCACCT TCCCCTATGA GAAGGAAGGC GTCGCAACCT TGGAAGACGG CCTCTACGTG
CTGGAGCCAA AGCTGAAAGA CCCGGCATTT AAGGAAAAGA TGGTCAAGTT CGTCCGTGCC
TCGATGAAGG GATGGAAATG GGCTGAAAAA AACCCGGACG AGGCAGCTGG TATCGTGCTG
GACAACGACG CCTCCGGAGC CCAGACCGAA AAGCATCAGA AGCGGATGAT GAGCGAAGTG
GCCAAGCTGA CGGAAGGCTC CAAGGGCGCG CTGGACGAGG CCGATTACAA GCGCACCGTG
GCCACCCTGC TCGGCGGCGG TTCCGATCCT GTCATATCCA AAGAACCCGT GGGTGCTTAT
ACCCATGAAA TCACCGATGC AGCGCTGAAA TAG
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| Protein sequence | MKSKITTLLM ATSISMLAMQ AHAADKLTLQ LKWVTQAQFA GYYVAKDKGF YKEEGLDVDI
KPGGPDIAPA QVLAGGGADV IVDWLPSALA TREKGVPLVN IAQPFKHSGM MLTCLKESGV
KTPADFKGKT LGVWFFGNEY PFLSWMAHLG IKTDGSADGV KVLKQGFNVD PLLQKQAACI
STMTYNEYWQ VIDAGIKPDQ LITFPYEKEG VATLEDGLYV LEPKLKDPAF KEKMVKFVRA
SMKGWKWAEK NPDEAAGIVL DNDASGAQTE KHQKRMMSEV AKLTEGSKGA LDEADYKRTV
ATLLGGGSDP VISKEPVGAY THEITDAALK
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