| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3271 |
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| Symbol | |
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| ID | 7387441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2704543 |
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| End bp | 2706729 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652171 |
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| Product | outer membrane heme receptor |
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| Protein accession | YP_002550355 |
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| Protein GI | 222149398 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.403034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTC GGGGAATTCG GCCTGTTCTG CTTGCCTGCA CGGCACTTTG CTCCTTCTAT
GCGGCCGTGC CTGTCATCGC GCAGGAAGCG GCAAAAACGG CGGAAAACGG CGGCTCTAAT
GGCCAGACCG AACTTTCGAC CATTACCGTC AAGGGCCAGA AGGTTGTAAA GGGTTCCGTG
GAAGACACGC CGGTGGCGAC CCATACCTCG GCCGAGCAAT TGCAGAAGAA GCAGATCGAC
GATGTCGATG ACCTCGGCAA TACGGTCGAG CCGAGTGTGA CCTATGTGAA GAATTCCAAG
AGCGTCAACA TTCGCGGCCT GGAGGCCGAC CGGGTGCTGA CGACCATCGA CGGCATTCCG
GTGCCCTATT TCTTCGACAC GGTTTATAGC TATGGCGGCG GTGCCGACAC CTATGATTTC
AATTCGCTGT CGTCGGTGGA CGTGCTGCAC AGCGCCGATT CCAGCCGCGC CGGGTCCGGT
GCGCTCGGCG GCGCGTTGCT CCTGCATACC TATGAGCCGG AGGACCTGAT TGGCGATGGC
AAGAGCTTTG GCGGTATCGC CAAGCTTGGC TATGATGGCT CGGACCGCTC GCTGACGGCC
TCAGGCGCGA TTGCCAAGAA ATTCGACAAT ACCTCGGTAC TGTTCCAGTC CTCCTACAAA
TACGGCCATG AGACCGAAAC AACAGGCGAT GTCGGCGGCA CCAGGGGAAC CCGGACCGAA
GCCGATCCGA TGAGCTATAA CGACCGCAAT TTCCTGTTCA AGATCCGCCA GGAGCTGGAA
GGCGGTCATA CGATCGGCCT GACGGCGGAG CATTACGACT ATAATTCCAA GAAGGATTAC
AAGTCCAATA CCAGCTACGG CACCACCTAT CGCGCCGGTG ATTACGATTA TATCCAGGAC
AAGGGCCGCG ACCGGGTTTC GCTCGATTAT GTCTATGACA GCACCTCTGC GGATAGCTGG
ATCGACAGCG CCTTCGCCAC CCTTTACTGG CAGCGCGCGA CCCGGGTGGA AGGCACATCC
AGCTACCGGC TGACGGCTCC AATCGGCATT TACGACCGGT CCATGGAAAG CGAGCAGCGT
GATTACGGGT TCAATGGCTA TGCCAATTCC GATTTCAGCA CTGGCGCGCT GAACCACAAG
CTGACCTTTG GCACCGATCT CCGCTTCAGC CAGAGCAGCT ATTATCTCGC CGGTCAGGAC
ACCTGCTCAG TCACTTACGT GTCCGGTTGC GCCTATTACC ACACCAACCA GTCCTATTCG
CCTGATGTCA ATTCCTACAA GCTCGGCGCT TTTGTCGAGG ACAAGATTTC GGTGGGCAAC
AGCCCCGTTT CGCTGACGCC TGGCCTGCGC GTCGATTGGT ACAAGGAAGA CCCGCAGGAG
ACCGACACCT ATAAGGGAAC CATGCCGGAG GGTCAGGACG GCGCCCACCT CTCTCCCAAG
CTGCGCGCCG CCTGGCAGGC GACGCCGGAT GCCGAGCTTT ACGCCCAGTT CTCCACGGCG
TTTAAATCGC CCAACGCCTA TCAGCTCTAT GTGGATTACG ACAATTCCCC GCTCTATCGC
TCAATCGGCA ATCCCGATCT GAAGCCGGAA ACCAGCTGGG GCTTCGATGT CGGTGCCAAT
CTTGGCAACG AGGATTTCGG TGGACGGATC AGCGCCTTTA CCACCCGCTA TAAGAATTTC
ATCGACACCT CGGACATCAT TCGCACCACC GGCTATGTGC TTGGGACCTA TGAATATATC
AACCGCGCCA ATGTCCGCAT CAGCGGCGTC GAGATCGAGG GCCACAAGAC CTTCACCAAC
GGCATCAACC TGCATGGCTC GATGTTCTAT GCGCGTGGCG TGGATCTTGA TACCGACGAG
TTGTTGAGCA CGGTAGCGCC GCTGAAAGCC ATTGTCGGTG TCGGCTATGA ACGGCAGACC
TGGGGCGCGG ATGTCAGTCT GGTGGCCGCC GCTGCCGTCT CCGACGACTC CAGCGCCTCC
ACCAAGCCAG CCGGATACGG CGTCGTCAAT CTGACGGGCT GGTGGGAGCC GGAACAGGCC
AAGGGCCTGC GCCTTCAGGC CGGTGTCTAC AATCTGTTCG ACAAGCAATA TTACGACGCG
CTTGAAGTGA AGGACGTCTC CAACGCCAAT GCGCTTTACT CCGAGGCCGG TCGTTATTTC
AAAATCGCCA TCTCGCAGAA GTTCTGA
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| Protein sequence | MSFRGIRPVL LACTALCSFY AAVPVIAQEA AKTAENGGSN GQTELSTITV KGQKVVKGSV
EDTPVATHTS AEQLQKKQID DVDDLGNTVE PSVTYVKNSK SVNIRGLEAD RVLTTIDGIP
VPYFFDTVYS YGGGADTYDF NSLSSVDVLH SADSSRAGSG ALGGALLLHT YEPEDLIGDG
KSFGGIAKLG YDGSDRSLTA SGAIAKKFDN TSVLFQSSYK YGHETETTGD VGGTRGTRTE
ADPMSYNDRN FLFKIRQELE GGHTIGLTAE HYDYNSKKDY KSNTSYGTTY RAGDYDYIQD
KGRDRVSLDY VYDSTSADSW IDSAFATLYW QRATRVEGTS SYRLTAPIGI YDRSMESEQR
DYGFNGYANS DFSTGALNHK LTFGTDLRFS QSSYYLAGQD TCSVTYVSGC AYYHTNQSYS
PDVNSYKLGA FVEDKISVGN SPVSLTPGLR VDWYKEDPQE TDTYKGTMPE GQDGAHLSPK
LRAAWQATPD AELYAQFSTA FKSPNAYQLY VDYDNSPLYR SIGNPDLKPE TSWGFDVGAN
LGNEDFGGRI SAFTTRYKNF IDTSDIIRTT GYVLGTYEYI NRANVRISGV EIEGHKTFTN
GINLHGSMFY ARGVDLDTDE LLSTVAPLKA IVGVGYERQT WGADVSLVAA AAVSDDSSAS
TKPAGYGVVN LTGWWEPEQA KGLRLQAGVY NLFDKQYYDA LEVKDVSNAN ALYSEAGRYF
KIAISQKF
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