Gene Avi_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3262 
Symbol 
ID7387435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2698720 
End bp2699184 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID643652165 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_002550349 
Protein GI222149392 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.390134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA CCGATGTTTC CGGCCTGTCG CAATTGGGCC GCCAGGTGGA TGCGCCGACC 
AGCCCTGAGA CCGCGGTGCT GGAACGGGTT CCCAATACCA ATGCCGGAAC CGATTACGTC 
GTGCGCTTCA CCGCGCCGGA ATTCACCTCG CTCTGCCCAA TGACCGGCCA GCCGGATTTC 
GCCCATATCG TCATCGATTA TATTCCGGGC GATTTCCTGG TGGAATCCAA GTCGCTGAAA 
TTGTTCATGA CCTCGTTCCG CAATCACGGT TCCTTCCACG AGGATTGCTC GATCTACATC 
GCCAAGCGGC TGGTGGATCT GCTCGACCCG AAATGGCTGC GGATCGGCGC CTATTGGTAC 
CCACGCGGCG GCATTCCCAT CGACGTGTTC TGGCAGACCG GAGAAGTGCC GAAGGGTGTC 
TGGTTGCCGG ATCAAGGCGT GCCGACCTAT CGTGGCCGGG GGTGA
 
Protein sequence
MSKTDVSGLS QLGRQVDAPT SPETAVLERV PNTNAGTDYV VRFTAPEFTS LCPMTGQPDF 
AHIVIDYIPG DFLVESKSLK LFMTSFRNHG SFHEDCSIYI AKRLVDLLDP KWLRIGAYWY 
PRGGIPIDVF WQTGEVPKGV WLPDQGVPTY RGRG