Gene Avi_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3236 
Symbol 
ID7388160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2677343 
End bp2677759 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID643652144 
Productacetyltransferase 
Protein accessionYP_002550328 
Protein GI222149371 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.315203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAT TGGTGCTTGA GATTTTTGAT GACGTGCCCG AAGACGCCCT TGAAACCATT 
GAAACGGCAA TACTCGATTT TAACAGAGAA CATCTCAGTC TACGACGAAA ACTTTTCATC
CCGCTTAAAG ATCAGGATGG AATCGTTGAT GGTGGTTTAA TCGGATACAC AGGTAGAGCC
TGGCTTTATA CGGAATTGTT GTTTGTCCCC GAATATCGTC GCGGTCAGGG GCTTGCCAGT
CAGTTGCTTA TGCTGGCCGA AGGCGAAGGC AGAAGGCGAG GATGCAAAGC TTCTATAGTG
GATACCATGA ATCCAACTGC CCGACGGCTC TATGAAAAAC TGGGGTATGA AACATTTGGC
AGTCTGGCAG ACCCGGCAGA GAGCTACAGC GTCACCTGGA TGAGAAAACA GCTGTAA
 
Protein sequence
MDKLVLEIFD DVPEDALETI ETAILDFNRE HLSLRRKLFI PLKDQDGIVD GGLIGYTGRA 
WLYTELLFVP EYRRGQGLAS QLLMLAEGEG RRRGCKASIV DTMNPTARRL YEKLGYETFG
SLADPAESYS VTWMRKQL