| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3226 |
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| Symbol | papS |
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| ID | 7388151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2666727 |
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| End bp | 2667989 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652135 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_002550319 |
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| Protein GI | 222149362 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.456659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGG TTGCGGATCA GCCCTGGTTT CAGGATGCGG CGCTAGCCAA GGTCTTTGCC
CTGTTAAACG CTGATGGCGG CGAGGTGCGG GTGGTGGGCG GCGCGGTGCG CAACAGTCTG
CTGGGTGAAC CGGTAGGCGA TATCGATCTT GCCACCACGC TTGTCCCCTC CGAAGTGACG
GCCCGGGCCG AGGCGGCAGG TATTAAGGCG GTGCCAACAG GCATTGAGCA TGGCACAGTG
ACGCTGGTGA TCGGCGGCAA GCCGTTTGAA GTGACGACGC TGCGGCGTGA CGTGGAAACC
AATGGCCGCC ACGCCGAGGT CGCGTTTGGC ACCGACTGGC AGGTGGATGC CGAGCGGCGC
GATTTCACCA TCAACGCGCT CTATGCCACG GCGTCTGGCG AGGTCATCGA TCCGGTCGGC
GGGCTGGCAG ATCTAGAAAC TGGCACGCTG CGATTCATTG GCGATGCTCG CCTGCGGATT
GCCGAGGATT ATCTGCGGGT GCTGCGCTTC TTCCGGTTTT TTGCCTGGTA TGGGCGCGGA
CGCCCGGATG CCGACGGCCT GCGGGCCTGT GCGGCAGCGC GTGACGAATT GCACCGGCTG
TCTGCCGAGC GGGTCTGGTC GGAGACGAAA AAACTCCTTT CCGCCAAAGA CCCGGGCCGG
GCGCTGCTGT GGATGCGCCA ATCCGGCGTG TTGACGGCGA TCCTGCCGGA AACGGAAAAA
TGGGGGATCG ATGCCATTCC GGGCCTGATT GCTACGGAAA CGGCCCTGAA TTGGCAGAGG
GAGCCCCTGT TGCGGCTGGT GGCAATGGTG CCCAATGACC CTGAGCGGAT GAAGGGACTG
GCCGAACGGC TGAAACTGTC GCGGGCCGAG GCGGAGTTTT TGCAGCGCTT TGCCACCGCG
CCGAAGATCA AGGACGATAT GGCCGATCTT GCGCTCGACC GGTTGCTCTA TCGGCACGAC
AAGCCGGGCA TTGTCGCGCA GTTGAAACTG TCGCTGGCTT CAGCCCGTGC CAAGGCAGAA
GGGGATACGG CCAGCATGGC GGCGTCGGCC CGCTGGTTTA GGCTGCTGCA ACGGGCGCAA
GCTTTCGAAA AGCCGGTCTT TCCCATCACC GGCAGTGATG CCATTGCCGC CGGTCTTGCG
CCCGGACCAG AGATTGGTCG GGTGTTATCG ACACTGGAAG ACAGCTGGGT TCAGGCCAAT
TTCACCTTCA GCCGGGAAAA GCTTCTTTCC CGGCTTAAAG AGGCGGTGAC GCCGTCGGGT
TGA
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| Protein sequence | MTTVADQPWF QDAALAKVFA LLNADGGEVR VVGGAVRNSL LGEPVGDIDL ATTLVPSEVT
ARAEAAGIKA VPTGIEHGTV TLVIGGKPFE VTTLRRDVET NGRHAEVAFG TDWQVDAERR
DFTINALYAT ASGEVIDPVG GLADLETGTL RFIGDARLRI AEDYLRVLRF FRFFAWYGRG
RPDADGLRAC AAARDELHRL SAERVWSETK KLLSAKDPGR ALLWMRQSGV LTAILPETEK
WGIDAIPGLI ATETALNWQR EPLLRLVAMV PNDPERMKGL AERLKLSRAE AEFLQRFATA
PKIKDDMADL ALDRLLYRHD KPGIVAQLKL SLASARAKAE GDTASMAASA RWFRLLQRAQ
AFEKPVFPIT GSDAIAAGLA PGPEIGRVLS TLEDSWVQAN FTFSREKLLS RLKEAVTPSG
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