Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3205 |
Symbol | petA |
ID | 7388140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2653495 |
End bp | 2654148 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643652124 |
Product | ubiquinol-cytochrome c reductase iron-sulfur subunit |
Protein accession | YP_002550308 |
Protein GI | 222149351 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.868237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCATG GCGCTCCAAC GGTTTGTCGC AGGCGATGCG AAGAGGATGG TTTGACCGTG AGCGAACACA ATACACAGAC TGAAACTGCG AGCGGAGGCA TGGGCGCGGG CGAGCCGACG CGCCGCGACT TCCTTTATCT CGCCACCGGC ATGGCGGGCG CAGTTGGCGC TGCGGCTGTG GCCTGGCCCT TTATCGACCA GATGCGGCCC GATGCCTCGA CCCTGGCTTT GGCCTCCATC GAGGTGGATG TCTCGGCGCT TCAGCCGGGC ATGTCGCTGA CGGTCAAGTG GCGCGGCAAG CCGGTCTTCA TCCGCAACCG CACCGACAAG GAAGTGGAAG AAGCCAAGGG CGTGCCGATT GCCCAGCTGA AGGACCCGGT GGCGCGCAAC GCCAATGCCG GCGACGACGC CCAGGCGACG GATCTTGCCC GCTCGGCGGG GCAGGGCAAG GAAAACTGGA TCGTGATGAT CGGCTCCTGC ACCCATCTCG GCTGCGTGCC GCTCGGTCAG GCCGGGGAAT ATGGCGGGTG GTTCTGTCCC TGCCATGGCT CGGTCTACGA TACGGCCGGC CGTATCCGCA AAGGTCCGGC GCCGGAAAAC CTGCATATTC CAAATTATGG GTTCGTATCC AATACCGTGA TCAAGATCGG CTGA
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Protein sequence | MTHGAPTVCR RRCEEDGLTV SEHNTQTETA SGGMGAGEPT RRDFLYLATG MAGAVGAAAV AWPFIDQMRP DASTLALASI EVDVSALQPG MSLTVKWRGK PVFIRNRTDK EVEEAKGVPI AQLKDPVARN ANAGDDAQAT DLARSAGQGK ENWIVMIGSC THLGCVPLGQ AGEYGGWFCP CHGSVYDTAG RIRKGPAPEN LHIPNYGFVS NTVIKIG
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