Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3198 |
Symbol | |
ID | 7388135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2648881 |
End bp | 2649360 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643652119 |
Product | Glutathione peroxidase protein |
Protein accession | YP_002550303 |
Protein GI | 222149346 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.246451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTTC ATGACTTTTC AGCCAAGGAT ATTACCGGTC GGGAGCGCAA GCTTGCCGAA TTTGCCGGAA AACTGCTCCT GATCGTCAAC ACCGCCAGCA AATGCGGCTT CACACCGCAA TATGAGGGCC TGGAGACCCT GCAAAAGCGT TTTCAGGACG ATCTCGTCAT CATCGGCTTT CCCTGCAACC AGTTCGGCGG CCAGGAACCG GGATCGGAAG CGGAAATTGC CAGCTTCTGC GACCTGAATT TCAAGGTCAG CTTCCCGATG TTTGCCAAGA TTGATGTGAA GGGCAACGAG GCCCATCCTC TCTACAAATA CCTGACCCAC GAAGTGCGCG GCATTCTCGG CACCGAGGCG ATCAAATGGA ATTTCACCAA ATTTCTGGTC GGCCGCGACG GCACCCCGAT TGCCCGCTAT GCGCCGATCA CCAAGCCGGA AGAAATTGCC GATGATATTG CCAAGGCGGT GAAGGGCTAA
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Protein sequence | MNVHDFSAKD ITGRERKLAE FAGKLLLIVN TASKCGFTPQ YEGLETLQKR FQDDLVIIGF PCNQFGGQEP GSEAEIASFC DLNFKVSFPM FAKIDVKGNE AHPLYKYLTH EVRGILGTEA IKWNFTKFLV GRDGTPIARY APITKPEEIA DDIAKAVKG
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