Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3172 |
Symbol | |
ID | 7388115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2627383 |
End bp | 2628516 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643652099 |
Product | hypothetical protein |
Protein accession | YP_002550283 |
Protein GI | 222149326 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0778857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGG AAACGCTGAC CATGACCACC ACGCTTGGTG ACAAGATCAA GGCGCTCATC CGGTTGAACG GTCCGTTGAG CGTCACGGAT TACTTTGCTC TCTGCCTGGC CGATCCGGAA TTCGGCTATT ACAAGACCCG TGAGCCGTTC GGCACCTCGG GCGATTTCAT CACCGGGCCG GAAATCAGCC AGATCTTCGG TGAGATGATC GGGGTTTTCA TTGTCCATGC CTGGCAGCGC CATGGCCTGC CCGCCCCCGT GCGGCTGGCC GAGGTCGGCC CCGGACGCGG CACGATGATG AGCGATATGC TGCGGGTGAT CGCCCGGCTT GCCCCTGATC TCTACCGGGA TTCCACCGTG CATCTGGTGG AAACCAGCGA CCGGCTGCGC CAGATCCAGC GCAACAGCCT GGAACCGCAT ATCGAAAAGA TTGACTGGCA TGACAGCTTT GGCGATGTGC CGGAAGGCTT CGTGCTGGTG GTGGCCAATG AGCTGTTCGA CGCCATTCCC ATCCGCCAGT TCGTCAAGCT CGGCCCGCAC TACCGCGAAC GCATGGTCAG CCTCGGTTTA GACGACGAGC TGATCTTCTC GACCGGGGTT GCGACACTCG ATCCGGCACT TTTGCCGCCG GGCGCCAGCG CCCAGCCTGA TGGCACTGTG TTTGAGTTTT CACCTGCCCG CCGCGCGGTG ATGGCGGCCA TGTGCGAGCG GCTGAAGGCC GAAGGCGGGG CGGCACTGAT CATCGATTAC GGCCATATCT CCACCGGTTT CGGCGATACG CTGCAAGCCT TGCGCGCCCA TGATTACGAT CCGCCGCTGG CCAATCCCGG CATTGCCGAC CTGACCAGCC ATGTCGATTT CGAGGATCTG GCCCGCACCG CCCTTGCCGC CGGGATCACG CCCAGCGGTT GCCTGCGCCA GGGCGATTTC CTGCTCGGCC TTGGCATCAA GGAACGAGCC GGAATTCTGG GACGCGGCAA GGACGAGGCC ACCCAGCTTG AACTGGCCGA GGCCGTCAAC CGTCTGGCCG GTGCCGGGGT CGGGCGGATG GGCGAATTGT TCAAGGTGCT TGCCCTCTCC AGCCCCACCC TGTCGCTCGC CCCGTTCCGG CCCCTGCCCC AGACGGATCT TTAG
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Protein sequence | MNRETLTMTT TLGDKIKALI RLNGPLSVTD YFALCLADPE FGYYKTREPF GTSGDFITGP EISQIFGEMI GVFIVHAWQR HGLPAPVRLA EVGPGRGTMM SDMLRVIARL APDLYRDSTV HLVETSDRLR QIQRNSLEPH IEKIDWHDSF GDVPEGFVLV VANELFDAIP IRQFVKLGPH YRERMVSLGL DDELIFSTGV ATLDPALLPP GASAQPDGTV FEFSPARRAV MAAMCERLKA EGGAALIIDY GHISTGFGDT LQALRAHDYD PPLANPGIAD LTSHVDFEDL ARTALAAGIT PSGCLRQGDF LLGLGIKERA GILGRGKDEA TQLELAEAVN RLAGAGVGRM GELFKVLALS SPTLSLAPFR PLPQTDL
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