Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3124 |
Symbol | |
ID | 7388664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2597362 |
End bp | 2598648 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652068 |
Product | hypothetical protein |
Protein accession | YP_002550252 |
Protein GI | 222149295 |
COG category | [S] Function unknown |
COG ID | [COG3673] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.850184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCTGGC AAGGGGACAG CGTGGGCAAA AACATCGTCA TTCTGTTTGA CGGCACGTCG AATGAAATTT CAGCCAGCCG CACCAATATC GTCAGACTGC TTGGCTGCCT GACCCGCAGC GACCAGCAAT TGGTCTATTA TGAGCCGGGC GTCGGCACGT TCGGTGCAGA CGACAACTGG CTGCGACTTG CACGCCAATC CGCCGAAGTC TGGGGCCTGG CAACGGGCTG GGGTCTCGAC CGCAATGTCA AGCGCGCCTA CCGGTTTCTT GTTGAGAACT ATCGGGCCGC ACCGAGGGAC GACGCCGGCA ACACAATTGG CGAGGACGAC AGGATCTACA TCCTCGGTTT CAGCCGCGGC GCCTATAGCG CCAGGGTTCT GGCCGGCTTC ATCAACAGCC TGGGCATTAT TGCGCCGAAT TTTCTCAATC TTGTGGACTA CGCCTACCGG ACCTATAAAA CCATTCCCAT AAGCGAGCGG CATGGCGAAA CGGCTGACAT CGTCAGCCAC TCGGCACCCT CCGCCTTTGC CGCCATGCGT CTTTATGAGC GGACATTGCG CGGCTACCGT CCGGCGATTG CCTTTCTCGG CCTGTTCGAC ACCGTATCGA CGGTGATCAA CCAGACACAG AGAGGTCTCA CATTCCAGAC CTTTCCCTTC ACGACCCGCA ATCCAAGCGT CGCCGCTGTC CGCCAGGCCC TGGCCATTGA TGAGCGGCGC ACGATGTTTC GACCGGTCTA TTGGAAGTCC GGCCAGCCAT TCTGGGGCAG CCCGTTCAAG CCGGAGGACC CGCATATGAT CAAGCCTCAG GATTTCAAAC AGGTCTGGTT TGCCGGCTCC CATGGCGATG TCGGCGGCGG CTATAGCGAG ACGCAGAGCG CGACGGCCAA GATTCCGCTG GCCTGGATGA TCGCCGAAAG CAGGCCATTC GGGCTGCACT ACGACGAAGA CACCGTCCAT GACATCGTCT ATGGCGAGGA TGACGACAAC GACCATGTGA AGCTCGATCC ACTGGCCCCG ATCCATGATT CCATGACCTG GTCCTGGCTG CCGTTCGAGA TCGTGCCGCG TCGCGTACCC TTTTCCTCCT GGCGCTGCCG GCCTCCCAAG GGCTGGTATC TGCCGCTCTG CGACCCTCGC TCTATCGAAA AAGGCAGCGT CATCCATCAA TCCGTCATCG ACCGGCTGGA CCACCCATCG AGGACGACCC CCTACAGGCC ACCCAATATG CCGCCGCCCG GCGATTACTC AATCGAGCCT TGGTCTACCA AGCCGATTGA AGATTGA
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Protein sequence | MIWQGDSVGK NIVILFDGTS NEISASRTNI VRLLGCLTRS DQQLVYYEPG VGTFGADDNW LRLARQSAEV WGLATGWGLD RNVKRAYRFL VENYRAAPRD DAGNTIGEDD RIYILGFSRG AYSARVLAGF INSLGIIAPN FLNLVDYAYR TYKTIPISER HGETADIVSH SAPSAFAAMR LYERTLRGYR PAIAFLGLFD TVSTVINQTQ RGLTFQTFPF TTRNPSVAAV RQALAIDERR TMFRPVYWKS GQPFWGSPFK PEDPHMIKPQ DFKQVWFAGS HGDVGGGYSE TQSATAKIPL AWMIAESRPF GLHYDEDTVH DIVYGEDDDN DHVKLDPLAP IHDSMTWSWL PFEIVPRRVP FSSWRCRPPK GWYLPLCDPR SIEKGSVIHQ SVIDRLDHPS RTTPYRPPNM PPPGDYSIEP WSTKPIED
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