Gene Avi_3030 details

Gene Information

• Locus tag: Avi_3030
• ID: 7388601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2521932
• End bp: 2522585
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643652006
• Product: hypothetical protein
• Protein accession: YP_002550190
• Protein GI: 222149233

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.82204
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCAA TTATTCTCGA AGAAAAGCCC ACCGACGGCG TTACGCTCGT CAACGGCAAA 
GAATACATGG CCAATGCCAA GGGCGCATTG GTGCCGCTGG AGCTGGTGAA GCCGCAGGAG 
AAGTTGCGCG ACGAATCGGT CCGCAAGGTC ATGGCCTATG CTGTCGATAT CTCGGCTCGG 
ATTGCCCGGT TTCGTGCCCA CTGCATGGAT GATCTCGACG CTTTGGACGC TGTCCTGGAG 
CAGGAATACG GAGCGAAGTC AGGTGGGATA AAGGGCAACC GTACCTATCA GACCATTGAC 
GGCCTGATGC GTGTATCCGT TGCGATCAAT GATTTTGAGA CAGCCGGTCC TGAGCTTCAG 
GTGGCAAAGA GCCTCATTGA CGAATGCCTC AACGAATGGA CATCCGACGC CCGCGTCGAG 
ATCCGCGCCC TTATCACCCG TGCCTTCGAT ACGGATAAAG AGGGCAAGGT CAACCTCAAG 
GAAATCAAGA AGCTCACGAA GCTGGCCATT GAGGACGAGC GGTGGGTGCA GGCTGTTCGC 
GCCATCAACG ACGCGATCAA CGTCGCCTAT TCCAAACAGT ATATCCGGTT TCATGTACGA 
AATTCCGTTC AGGACGAATG GATCGCTGTC ACCGTCGATA TTGCCAAGGC GTGA 

 

Protein sequence

MEAIILEEKP TDGVTLVNGK EYMANAKGAL VPLELVKPQE KLRDESVRKV MAYAVDISAR 
IARFRAHCMD DLDALDAVLE QEYGAKSGGI KGNRTYQTID GLMRVSVAIN DFETAGPELQ 
VAKSLIDECL NEWTSDARVE IRALITRAFD TDKEGKVNLK EIKKLTKLAI EDERWVQAVR 
AINDAINVAY SKQYIRFHVR NSVQDEWIAV TVDIAKA