Gene Avi_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2926 
Symbol 
ID7386106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2442176 
End bp2443201 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID643651933 
Producttranscriptional regulator ArsR family 
Protein accessionYP_002550118 
Protein GI222149161 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.276584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGACG GAAGCGGCAT GAGCATGTCT TTTACATTGG ACGGTCTGGT CGATCTTCTC 
AAGGCTGCAG GTGAACCCAC CCGCCTGCGT CTGCTGGCGC TTCTGGCGGC GGGAGATCTG
ACCGTATCTG ACCTGACCGA CATTCTCGGT CAATCCCAGC CGCGTATCTC GCGCCATCTC
AAGCTTCTTG CTGAGGCGGA ATTGGTGGAT CGTTACCAGG AAGGTGCCTG GGCCTATTTT
CGTTTGAAGC AGGAAGGGGC TGCGGGCGAT CTCGCGCGTC ATCTGCTGGC GGTTGCTTCC
ACGTCCGATC CTGTTTTAGC GCGTGACGGC GAGCGGCTTG GAGCGGTCAA ACGGGCGCGG
GCGGAAAAGG CACAGGCCTA TTTCAGTCGC AACGCCGCTG AATGGGACGA GTTGCGCCGG
CTGCATATCA ATGACCGCGA GGTCGAAGAT GCACTGGTGA AGCTGATCGG CGAAGACACA
GTCGAGGCTT TGCTGGATCT TGGCACCGGG ACCGGGCGTA TCCTGCAATT GCTGGAAAGC
CGCTATCAAC GGGCGGTGGG TATCGATGCC AGCCGCGACA TGCTGGCGGT TGCCCGGGTC
AATCTCGATA AGGCTGGTGT GGCCAAGGCT GCCGTACGCC AAGGGGATAT TCTCAATCTG
CCGCTGGATG GTGGCGAGTT CGATGTGGTG ATCATTCATC AGGTGCTGCA TTTCCTGGTG
GAGCCGGAGC TGGCGCTGAA TGAAGCGGCG CGTATGCTGA AGCCCGGCGG GCGGCTGGTG
ATCATTGATC TTGCCCCGCA TAAGCTGGAG CATTTGCGCG AAGATCATGC GCATGTGCGG
TTGGGCTTTT CCCATCAGTT AATGGCGGGC TGGCTCGTCA AGACAGGTTT TGACGTCACA
AACGCAATCG ATATTGCGCC GAACCATAGG GATGGGGAGG CGCTTACAGC AACAATCTGG
CTGGCGACCT ATGGTCAAGC CACAGCATCC GTGGCGCAAC AGGCCGCGCG GGCGGGAGTT
TACTGA
 
Protein sequence
MIDGSGMSMS FTLDGLVDLL KAAGEPTRLR LLALLAAGDL TVSDLTDILG QSQPRISRHL 
KLLAEAELVD RYQEGAWAYF RLKQEGAAGD LARHLLAVAS TSDPVLARDG ERLGAVKRAR
AEKAQAYFSR NAAEWDELRR LHINDREVED ALVKLIGEDT VEALLDLGTG TGRILQLLES
RYQRAVGIDA SRDMLAVARV NLDKAGVAKA AVRQGDILNL PLDGGEFDVV IIHQVLHFLV
EPELALNEAA RMLKPGGRLV IIDLAPHKLE HLREDHAHVR LGFSHQLMAG WLVKTGFDVT
NAIDIAPNHR DGEALTATIW LATYGQATAS VAQQAARAGV Y