| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2855 |
|---|
| Symbol | |
|---|
| ID | 7385971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2374426 |
|---|
| End bp | 2376273 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643651880 |
|---|
| Product | aminopeptidase P |
|---|
| Protein accession | YP_002550065 |
|---|
| Protein GI | 222149108 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.151191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAA GTTTTGACGT TACCTCCACT CCTCAATTCG GTCGCGACCG TGTCGCGGCG
CTGCGTGACC GGTTTTCGGG GCTGGGTATC GATGGTTTTC TGATCCCGCG GGCCGATGAA
TATCAGGGCG AATATGTTCC AGCCTCAGCC GAACGCCTGT CCTGGCTGAC CGGCTTTACC
GGCTCGGCGG GCGAAGTTCT GGTAACGCAG AGCCAGGCCG TGGTCTTTGT CGATGGCCGC
TATGTCACGC AAGTGCGCCA GCAGGTGGAT CTCGACGTGT TTACGCCGGG CGACCTGATC
GATGAGCCTC CAGCCAAGTG GATCCCGGCA CATGCACCGA AGAGCTTCCG TTTGGGCATC
GATCCATGGA TGCATACGGT GGCGCAGGTG TCGCGGCTGG AGAAGGCGCT GAACGAGATC
GGCGGCACGA TTGTGCTGGT CGATGAAAAT CCGCTCGATG CTGTCTGGAC CGACCGTCCT
GCCGAGCCGT TGGGCGCAGT ATCTATCCAG CCGATCTCGG CCGCCGGGGT CGAGGCAGGT
GAGAAGATTG CCAAAATCGC CGATGGCCTC GCAGCAAAAG ACGTAGCGGC GGTGGTGATC
ACCGATCCAT CGTCGGTGGC CTGGATCTTT AATATTCGTG GCCAGGATGT ACCTCACACG
CCGCATCCGC TGTCGCGGGC GATCATTCAT GCCGATGGCA AGGCCGAACT GTTTCTGGAC
CGGCGCAAGA CGAACCTTGA GGTCGAGACC TATCTCGATG GTCTTGCCAC CCGGCTTGAT
CCGCAGAATT TCGTGTCGCA ATTGGCAATG CTGGCCCAGA CCGGCGCCCG TATTCTCATG
GACCCTGATC TCTCGCCCGC TGCACTGGCG CGTCTGGTGG CGAGCCGGGG TGGCAAGGTT
GTGGATGGTG CCGATCCGGC CAAGCTTGGC CGGGCGGTGA AAAACCTGGT TGAGCTGAAT
GGCTCGGCTG TCGCCCATGT ACAGGACGGC GTGGCCGTGG TCGAATTCCT CAGCTGGCTC
GACCGGCAAC CGGCGGGCAG CGCGACGGAA ATCAGTGCGA CGCGGGCGTT GGAAACCATC
CGGGCCAAAG TGGGCGAGCG GATGCAGAAC CCGCTGAAGG ATGTGTCCTT CGATACGATT
GCCGGGGCAG GCGAACATGC CGCGATCATG CATTACCGCG TAACGACGGA AAGCGACCGG
CCGATCCGGG CAGGCGAAAT GTTCCTGGTC GATTCAGGCG CGCAATATGT CAACGGCACC
ACGGATATAA CCCGCACGCT TGCGGTCGGC GCGGTGCCGG ACGATCAGAA ACGGTTCTTC
ACGCTGGTGT TGAAGGGCAT GATCGCCATC AGCACGGCGC GTTTTCCCAA GGGCACGCGC
GGCTGCGATC TCGATCCGCT GGCACGCATC AACCTGTGGA AGGCCGGGGC GGATTTCGCC
CATGGCACCG GCCACGGTGT CGGCTCGTTT CTGTCCGTGC ATGAGGGACC GCAGCGGATT
TCCCGGCTTT CCACCCAGGA ATTGCTGCCA GGCATGATTC TCTCCAATGA GCCTGGTTAC
TACCGGCCCG GTCATTTTGG CATCCGGATC GAAAACCTGA TCTATGTGCG CGATCTGGAG
CCGGTGAACG GCGGCGACCT TGATATGATG AGTTTCGAGA CGCTGACCTT CGCGCCCATC
GACCGCTACC TGATCGTTGA GGACATGCTG ACACGTGAGG AGCTGCGCTG GCTGGACGAT
TACCACGCCC GCACACGAGA GCAGCTTTTG CCGCTGGTGG AGGGTGACGA TGCCCGAAGC
TGGCTGATCC GGGCAACCGA GCCACTGGCG CGGTCCGCTG CTGCATAA
|
|---|
| Protein sequence | MFQSFDVTST PQFGRDRVAA LRDRFSGLGI DGFLIPRADE YQGEYVPASA ERLSWLTGFT
GSAGEVLVTQ SQAVVFVDGR YVTQVRQQVD LDVFTPGDLI DEPPAKWIPA HAPKSFRLGI
DPWMHTVAQV SRLEKALNEI GGTIVLVDEN PLDAVWTDRP AEPLGAVSIQ PISAAGVEAG
EKIAKIADGL AAKDVAAVVI TDPSSVAWIF NIRGQDVPHT PHPLSRAIIH ADGKAELFLD
RRKTNLEVET YLDGLATRLD PQNFVSQLAM LAQTGARILM DPDLSPAALA RLVASRGGKV
VDGADPAKLG RAVKNLVELN GSAVAHVQDG VAVVEFLSWL DRQPAGSATE ISATRALETI
RAKVGERMQN PLKDVSFDTI AGAGEHAAIM HYRVTTESDR PIRAGEMFLV DSGAQYVNGT
TDITRTLAVG AVPDDQKRFF TLVLKGMIAI STARFPKGTR GCDLDPLARI NLWKAGADFA
HGTGHGVGSF LSVHEGPQRI SRLSTQELLP GMILSNEPGY YRPGHFGIRI ENLIYVRDLE
PVNGGDLDMM SFETLTFAPI DRYLIVEDML TREELRWLDD YHARTREQLL PLVEGDDARS
WLIRATEPLA RSAAA
|
|---|
| |