Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2837 |
Symbol | |
ID | 7385959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2362149 |
End bp | 2363147 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643651868 |
Product | hypothetical protein |
Protein accession | YP_002550053 |
Protein GI | 222149096 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.602267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATCAT TTGAGACCTT TGAAGATGCA CTTTCCGATG CAAAAGGTCA GAAAAACCTT TTGGTTGGCA ATGGCCTCAG CATCGCGTTT GATGAAAAAT TTGGTTATAG TCAATTATTC GATGTAGCAG ATTTTATAAA TAACAACCCT AAAGTCGCCT CTATTTTTAA CGCTCTTAAA ACCAAGGACT TCGAAACAGT TGTCGGAGCT CTCTATAGTG CTAGCGAGAT TGCTAGGAAT TTCGAAGAAC ACGCTTTTTC AGAAAAAATT ATCGACCATA TTTCCGTATT AAAGACAGCT CTTATCGAAG CTGTAAGGCA CATTCATCCA GGGAGCAGTA ACTTGGTAAG TGCCGACCAA GCGGCCAAAC TAAGAAGCTT CATGCAACCT TTCTTGATGG AAAATGGCTG CATATTTTCT CTCAACTACG ATGCTTTGAT TTATTGGTCT TTACTAAAGG ACGGAACGCC AAAACTAAAT TTTGCAGATG GATTTTCCAC GAAAGAAGGG GCAGAACTGA AATTTGCCGG AGATGGATGC CCTAAAGAAA TAAACGTGCT GTTTCCGCAT GGAACGTTGT TTATATTCGA TAAAAATGGC GATGCATTTA AGCCAAAAGC TAAAGAAAAA ACGCTCATTG AAATAATTAC CGAGCATATG GAAAATGGAA ATTTTCCACT TTTCGTCAGC GAGGGAAGCT CGGAGCAAAA GTTAATGGCT ATAAGAAAGA GTTTCTATTT AAATTACGCA TATGAAAAAA TAGAAAGGCA ACAAGACAAC TTTTTCACCT TCGGCCACTC ACTTGATCTT CAGTCAGACG GACACATTTT CAGAAAAATT GCTGAAAATA AGAACGTCTC AAACCTTTAT GCGTCGTACT ACGACAGTAA GGAAGCGCTG TTGGGAAATC TTCATCACCT GCTGGACGCA GCCAAGCGTG ATTCGACAAA TCCATTGAAT ATACATACAT TTCCCGCGAA AAGTGTATCC TGTTGGTAG
|
Protein sequence | MTSFETFEDA LSDAKGQKNL LVGNGLSIAF DEKFGYSQLF DVADFINNNP KVASIFNALK TKDFETVVGA LYSASEIARN FEEHAFSEKI IDHISVLKTA LIEAVRHIHP GSSNLVSADQ AAKLRSFMQP FLMENGCIFS LNYDALIYWS LLKDGTPKLN FADGFSTKEG AELKFAGDGC PKEINVLFPH GTLFIFDKNG DAFKPKAKEK TLIEIITEHM ENGNFPLFVS EGSSEQKLMA IRKSFYLNYA YEKIERQQDN FFTFGHSLDL QSDGHIFRKI AENKNVSNLY ASYYDSKEAL LGNLHHLLDA AKRDSTNPLN IHTFPAKSVS CW
|
| |